#------------------------------------------------------------------------------
#$Date: 2021-09-22 04:47:00 +0300 (Wed, 22 Sep 2021) $
#$Revision: 269240 $
#$URL: file:///home/coder/svn-repositories/cod/cif/2/10/88/2108876.cif $
#------------------------------------------------------------------------------
#
# This file is available in the Crystallography Open Database (COD),
# http://www.crystallography.net/. The original data for this entry
# were provided by IUCr Journals, http://journals.iucr.org/.
#
# The file may be used within the scientific community so long as
# proper attribution is given to the journal article from which the
# data were obtained.
#
data_2108876
loop_
_publ_author_name
'Novelli, Giulia'
'McMonagle, Charles J.'
'Kleemiss, Florian'
'Probert, Michael'
'Puschmann, Horst'
'Grabowsky, Simon'
'Maynard-Casely, Helen E.'
'McIntyre, Garry J.'
'Parsons, Simon'
_publ_section_title
;
 Accurate H-atom parameters for the two polymorphs of
 <small>L</small>-histidine at 5, 105 and 295K
;
_journal_coeditor_code           UM5050
_journal_issue                   5
_journal_name_full               'Acta Crystallographica Section B'
_journal_page_first
;
;
_journal_paper_doi               10.1107/S205252062100740X
_journal_volume                  77
_journal_year                    2021
_chemical_absolute_configuration syn
_chemical_formula_moiety         'C6 H9 N3 O2'
_chemical_formula_sum            'C6 H9 N3 O2'
_chemical_formula_weight         155.16
_chemical_name_common            L-histidine
_chemical_name_systematic        '2-Amino-3-(1H-imidazol-4-yl)propanoic acid'
_space_group_crystal_system      monoclinic
_space_group_IT_number           4
_space_group_name_Hall           'P 2yb'
_space_group_name_H-M_alt        'P 1 21 1'
_atom_sites_solution_hydrogens   difmap
_audit_creation_date             2021-01-18
_audit_creation_method
;
Olex2 1.3
(compiled 2020.11.12 svn.r5f609507 for OlexSys, GUI svn.r6226)
;
_cell_angle_alpha                90
_cell_angle_beta                 97.065(2)
_cell_angle_gamma                90
_cell_formula_units_Z            2
_cell_length_a                   5.1651(2)
_cell_length_b                   7.2324(2)
_cell_length_c                   9.4957(3)
_cell_measurement_reflns_used    4301
_cell_measurement_temperature    5
_cell_measurement_theta_max      30.47
_cell_measurement_theta_min      3.55
_cell_volume                     352.03(2)
_computing_cell_refinement       'LaueG (Piltz, 2011)'
_computing_data_collection       'MAATEL/ANSTO control program'
_computing_data_reduction
'argonne_boxes (Wilkinson et al., 1988) & LaueG (Piltz, 2011)'
_computing_molecular_graphics    'Olex2 1.3 (Dolomanov et al., 2009)'
_computing_publication_material  'Olex2 1.3 (Dolomanov et al., 2009)'
_computing_structure_refinement  'XL  (Sheldrick, 2008)'
_computing_structure_solution    'from X-ray model at 5 K'
_diffrn_ambient_temperature      5
_diffrn_measured_fraction_theta_full 0.762
_diffrn_measured_fraction_theta_max 0.762
_diffrn_measurement_details      '22 images, exposure time   0 minutes'
_diffrn_measurement_device       'Laue image-plate diffractometer'
_diffrn_measurement_device_type  KOALA
_diffrn_measurement_method       Laue
_diffrn_radiation_probe          neutron
_diffrn_radiation_type           neutron
_diffrn_radiation_wavelength     0.80
_diffrn_reflns_av_R_equivalents  0.1382
_diffrn_reflns_av_unetI/netI     0.1519
_diffrn_reflns_limit_h_max       9
_diffrn_reflns_limit_h_min       -9
_diffrn_reflns_limit_k_max       13
_diffrn_reflns_limit_k_min       -13
_diffrn_reflns_limit_l_max       15
_diffrn_reflns_limit_l_min       -15
_diffrn_reflns_number            16604
_diffrn_reflns_reduction_process 'LaueG (Piltz, 2011)'
_diffrn_reflns_resolution_max    1.82
_diffrn_reflns_theta_full        70.98
_diffrn_reflns_theta_max         71.08
_diffrn_source                   'nuclear reactor'
_diffrn_source_details           'thermal neutrons, supermirror guides'
_diffrn_source_type
'OPAL reactor, ANSTO, Lucas Heights, Australia'
_exptl_absorpt_coefficient_mu    0.0
_exptl_absorpt_correction_type   none
_exptl_crystal_colour            colourless
_exptl_crystal_density_diffrn    1.464
_exptl_crystal_description       plate
_exptl_crystal_F_000             92
_exptl_crystal_size_max          0.45
_exptl_crystal_size_mid          0.35
_exptl_crystal_size_min          0.30
_refine_diff_density_max         1.62
_refine_diff_density_min         -1.995
_refine_diff_density_rms         0.391
_refine_ls_abs_structure_details
;
Absolute structure known from synthesis
;
_refine_ls_extinction_method     none
_refine_ls_goodness_of_fit_ref   1.212
_refine_ls_hydrogen_treatment    refall
_refine_ls_matrix_type           full
_refine_ls_number_parameters     181
_refine_ls_number_reflns         1629
_refine_ls_number_restraints     1
_refine_ls_restrained_S_all      1.212
_refine_ls_R_factor_all          0.0933
_refine_ls_R_factor_gt           0.0601
_refine_ls_shift/su_max          0.000
_refine_ls_shift/su_mean         0.000
_refine_ls_structure_factor_coef Fsqd
_refine_ls_weighting_details
'w=1/[σ²(Fo²)+(0.0300P)²] where P=(Fo²+2Fc²)/3'
_refine_ls_weighting_scheme      calc
_refine_ls_wR_factor_gt          0.0769
_refine_ls_wR_factor_ref         0.0816
_reflns_Friedel_coverage         0.000
_reflns_Friedel_fraction_full    0.000
_reflns_Friedel_fraction_max     0.000
_reflns_number_gt                1267
_reflns_number_total             1629
_reflns_threshold_expression     'I > 2σ(I)'
_cod_data_source_file            um5050sup1.cif
_cod_data_source_block           HMTN00
_cod_database_code               2108876
_shelx_shelxl_version_number     2017/1
_shelx_space_group_comment
;
The symmetry employed for this shelxl refinement is uniquely defined
by the following loop, which should always be used as a source of
symmetry information in preference to the above space-group names.
They are only intended as comments.
;
_olex2_refinement_description
;
;
_olex2_submission_special_instructions 'No special instructions were received'
loop_
_space_group_symop_operation_xyz
'x, y, z'
'-x, y+1/2, -z'
loop_
_atom_site_label
_atom_site_type_symbol
_atom_site_fract_x
_atom_site_fract_y
_atom_site_fract_z
_atom_site_U_iso_or_equiv
_atom_site_adp_type
_atom_site_occupancy
_atom_site_site_symmetry_order
_atom_site_calc_flag
_atom_site_refinement_flags_posn
_atom_site_refinement_flags_adp
_atom_site_refinement_flags_occupancy
_atom_site_disorder_assembly
_atom_site_disorder_group
O2 O 0.3153(3) 0.4532(3) 1.0159(2) 0.0075(4) Uani 1 1 d . . . . .
O1 O 0.7418(3) 0.4476(3) 1.0990(3) 0.0089(4) Uani 1 1 d . . . . .
N1 N 0.8766(2) 0.63531(16) 0.87289(15) 0.0071(3) Uani 1 1 d . . . . .
H1A H 0.9462(7) 0.6394(6) 0.7740(5) 0.0197(8) Uani 1 1 d . . . . .
H1B H 1.0169(7) 0.5658(5) 0.9425(5) 0.0218(9) Uani 1 1 d . . . . .
H1C H 0.8500(8) 0.7702(5) 0.9113(5) 0.0201(8) Uani 1 1 d . . . . .
N3 N 0.7208(2) 0.44435(18) 0.38771(17) 0.0079(3) Uani 1 1 d . . . . .
H3 H 0.6899(7) 0.4374(6) 0.2770(5) 0.0203(8) Uani 1 1 d . . . . .
N2 N 0.9220(2) 0.51526(17) 0.60102(15) 0.0074(3) Uani 1 1 d . . . . .
C1 C 0.5534(3) 0.4757(2) 1.0048(2) 0.0052(3) Uani 1 1 d . . . . .
C4 C 0.6990(3) 0.4138(2) 0.6167(2) 0.0069(4) Uani 1 1 d . . . . .
C6 C 0.5721(3) 0.3694(2) 0.4843(2) 0.0069(3) Uani 1 1 d . . . . .
H6 H 0.3963(8) 0.2908(6) 0.4535(6) 0.0232(9) Uani 1 1 d . . . . .
C2 C 0.6204(3) 0.5360(2) 0.8578(2) 0.0056(3) Uani 1 1 d . . . . .
H2 H 0.4702(6) 0.6330(6) 0.8096(5) 0.0189(8) Uani 1 1 d . . . . .
C5 C 0.9266(3) 0.5300(3) 0.4619(2) 0.0076(3) Uani 1 1 d . . . . .
H5 H 1.0729(8) 0.6031(6) 0.4118(6) 0.0244(10) Uani 1 1 d . . . . .
C3 C 0.6302(3) 0.3659(2) 0.7616(2) 0.0066(3) Uani 1 1 d . . . . .
H3A H 0.7723(8) 0.2667(6) 0.8134(5) 0.0214(9) Uani 1 1 d . . . . .
H3B H 0.4375(8) 0.2981(6) 0.7524(6) 0.0248(10) Uani 1 1 d . . . . .
loop_
_atom_type_symbol
_atom_type_description
_atom_type_scat_dispersion_real
_atom_type_scat_dispersion_imag
_atom_type_scat_source
C C 0.0000 0.0000
'Neutron Data Booklet, ILL Grenoble, France (2003) ISBN 0-9704143-7-4'
H H 0.0000 0.0000
'Neutron Data Booklet, ILL Grenoble, France (2003) ISBN 0-9704143-7-4'
N N 0.0000 0.0000
'Neutron Data Booklet, ILL Grenoble, France (2003) ISBN 0-9704143-7-4'
O O 0.0000 0.0000
'Neutron Data Booklet, ILL Grenoble, France (2003) ISBN 0-9704143-7-4'
loop_
_geom_angle_atom_site_label_1
_geom_angle_atom_site_label_2
_geom_angle_atom_site_label_3
_geom_angle
_geom_angle_site_symmetry_1
_geom_angle_site_symmetry_3
_geom_angle_publ_flag
C4 N2 C5 105.40(14) . . ?
O1 C1 C2 116.78(16) . . ?
N1 C2 C3 110.34(13) . . ?
N2 C4 C3 120.82(15) . . ?
N2 C5 N3 111.87(15) . . ?
C2 N1 H1A 109.0(3) . . ?
C5 N3 H3 124.0(2) . . ?
C1 C2 H2 109.3(3) . . ?
C2 C3 H3B 107.9(3) . . ?
N3 C6 H6 123.1(3) . . ?
C5 N3 C6 107.49(15) . . ?
O2 C1 C2 116.30(16) . . ?
C1 C2 C3 109.83(12) . . ?
N2 C4 C6 109.39(15) . . ?
N3 C6 C4 105.86(14) . . ?
C2 N1 H1B 111.4(2) . . ?
C6 N3 H3 128.5(2) . . ?
C3 C2 H2 109.6(3) . . ?
C4 C3 H3A 109.9(3) . . ?
N2 C5 H5 125.2(3) . . ?
C4 C6 H6 131.1(3) . . ?
O1 C1 O2 126.9(2) . . ?
N1 C2 C1 110.08(14) . . ?
C2 C3 C4 112.85(13) . . ?
C3 C4 C6 129.79(14) . . ?
C2 N1 H1C 109.0(2) . . ?
N1 C2 H2 107.6(2) . . ?
C2 C3 H3A 109.0(3) . . ?
C4 C3 H3B 110.0(3) . . ?
N3 C5 H5 122.9(3) . . ?
H1B N1 H1C 109.6(3) . . ?
H1A N1 H1C 110.9(4) . . ?
H1A N1 H1B 107.0(3) . . ?
H3A C3 H3B 107.0(3) . . ?
loop_
_geom_bond_atom_site_label_1
_geom_bond_atom_site_label_2
_geom_bond_distance
_geom_bond_site_symmetry_2
_geom_bond_publ_flag
O2 C1 1.258(2) . ?
O1 C1 1.255(3) . ?
N1 H1A 1.046(5) . ?
N1 H1B 1.047(4) . ?
N1 H1C 1.056(4) . ?
N1 C2 1.4970(19) . ?
N3 H3 1.045(5) . ?
N3 C6 1.378(2) . ?
N3 C5 1.351(2) . ?
N2 C4 1.3891(19) . ?
N2 C5 1.329(2) . ?
C1 C2 1.542(3) . ?
C4 C6 1.382(3) . ?
C4 C3 1.503(3) . ?
C2 H2 1.103(4) . ?
C2 C3 1.537(2) . ?
C6 H6 1.081(5) . ?
C3 H3A 1.098(5) . ?
C3 H3B 1.103(4) . ?
C5 H5 1.080(5) . ?
loop_
_geom_torsion_atom_site_label_1
_geom_torsion_atom_site_label_2
_geom_torsion_atom_site_label_3
_geom_torsion_atom_site_label_4
_geom_torsion
_geom_torsion_site_symmetry_1
_geom_torsion_site_symmetry_2
_geom_torsion_site_symmetry_3
_geom_torsion_site_symmetry_4
_geom_torsion_publ_flag
C5 N2 C4 C3 178.96(15) . . . . ?
C6 N3 C5 N2 0.2(2) . . . . ?
O1 C1 C2 C3 94.23(19) . . . . ?
N1 C2 C3 C4 -57.55(18) . . . . ?
C2 C3 C4 C6 -127.54(17) . . . . ?
H1A N1 C2 C1 162.9(3) . . . . ?
H1B N1 C2 C1 45.1(3) . . . . ?
H1C N1 C2 C1 -75.9(3) . . . . ?
C4 N2 C5 H5 178.8(3) . . . . ?
H3 N3 C5 H5 2.4(5) . . . . ?
H3 N3 C6 H6 -0.2(5) . . . . ?
C5 N2 C4 C6 -0.12(17) . . . . ?
C5 N3 C6 C4 -0.23(17) . . . . ?
O2 C1 C2 N1 155.13(16) . . . . ?
C1 C2 C3 C4 -179.07(13) . . . . ?
N2 C4 C6 N3 0.22(16) . . . . ?
H1A N1 C2 C3 41.5(3) . . . . ?
H1B N1 C2 C3 -76.3(3) . . . . ?
H1C N1 C2 C3 162.7(3) . . . . ?
C6 N3 C5 H5 -178.7(3) . . . . ?
C5 N3 C6 H6 -179.0(3) . . . . ?
O1 C1 C2 H2 -145.5(3) . . . . ?
C4 N2 C5 N3 0.0(2) . . . . ?
O1 C1 C2 N1 -27.5(2) . . . . ?
O2 C1 C2 C3 -83.19(19) . . . . ?
C2 C3 C4 N2 53.59(19) . . . . ?
C3 C4 C6 N3 -178.75(14) . . . . ?
H1A N1 C2 H2 -78.0(4) . . . . ?
H1B N1 C2 H2 164.2(4) . . . . ?
H1C N1 C2 H2 43.2(4) . . . . ?
H3 N3 C5 N2 -178.7(3) . . . . ?
H3 N3 C6 C4 178.6(3) . . . . ?
O2 C1 C2 H2 37.1(3) . . . . ?
N1 C2 C3 H3A 64.9(3) . . . . ?
C1 C2 C3 H3B 59.2(3) . . . . ?
H2 C2 C3 H3B -61.0(4) . . . . ?
H3B C3 C4 N2 174.2(3) . . . . ?
C3 C4 C6 H6 -0.1(4) . . . . ?
N1 C2 C3 H3B -179.3(3) . . . . ?
H2 C2 C3 C4 60.8(3) . . . . ?
H3A C3 C4 N2 -68.3(3) . . . . ?
H3B C3 C4 C6 -7.0(3) . . . . ?
C1 C2 C3 H3A -56.7(3) . . . . ?
H2 C2 C3 H3A -176.8(3) . . . . ?
H3A C3 C4 C6 110.6(3) . . . . ?
N2 C4 C6 H6 178.8(3) . . . . ?

_cod_database_fobs_code 2108876
