#------------------------------------------------------------------------------
#$Date: 2018-09-26 20:45:16 +0300 (Wed, 26 Sep 2018) $
#$Revision: 211179 $
#$URL: file:///home/coder/svn-repositories/cod/cif/4/03/30/4033039.cif $
#------------------------------------------------------------------------------
#
# This file is available in the Crystallography Open Database (COD),
# http://www.crystallography.net/
#
# All data on this site have been placed in the public domain by the
# contributors.
#
data_4033039
loop_
_publ_author_name
'Liu, Li-Juan'
'Wang, Wei-Min'
'Yao, Lan'
'Meng, Fan-Jie'
'Sun, Yong-Ming'
'Xu, Hao'
'Xu, Zhong-Yuan'
'Li, Qiang'
'Zhao, Chang-Qiu'
'Han, Li-Biao'
_publ_section_title
;
 Reinvestigation of the Substitutions Reaction of Stereogenic Phosphoryl
 Compounds: Stereochemistry, Mechanism, and Applications.
;
_journal_issue                   23
_journal_name_full               'The Journal of organic chemistry'
_journal_page_first              11990
_journal_page_last               12002
_journal_paper_doi               10.1021/acs.joc.7b01326
_journal_volume                  82
_journal_year                    2017
_chemical_absolute_configuration unknown
_chemical_formula_moiety         'C23 H31 O2 P'
_chemical_formula_sum            'C23 H31 N0 O2 P'
_chemical_formula_weight         370.45
_space_group_IT_number           4
_symmetry_cell_setting           monoclinic
_symmetry_space_group_name_Hall  'P 2yb'
_symmetry_space_group_name_H-M   'P 1 21 1'
_atom_sites_solution_hydrogens   geom
_atom_sites_solution_primary     direct
_atom_sites_solution_secondary   difmap
_audit_creation_method           SHELXL-97
_cell_angle_alpha                90.00
_cell_angle_beta                 100.7270(10)
_cell_angle_gamma                90.00
_cell_formula_units_Z            2
_cell_length_a                   12.4777(11)
_cell_length_b                   5.7970(7)
_cell_length_c                   15.4190(19)
_cell_measurement_reflns_used    1629
_cell_measurement_temperature    298(2)
_cell_measurement_theta_max      25.040
_cell_measurement_theta_min      2.689
_cell_volume                     1095.8(2)
_computing_cell_refinement       'SAINT  (Siemens, 1996)'
_computing_data_collection       'SMART (Siemens, 1996)'
_computing_data_reduction        SAINT
_computing_molecular_graphics    'SHELXTL (Sheldrick, 2008)'
_computing_publication_material  SHELXTL
_computing_structure_refinement  'SHELXL-97 (Sheldrick, 2008)'
_computing_structure_solution    'SHELXS-97 (Sheldrick, 2008)'
_diffrn_ambient_temperature      298(2)
_diffrn_measured_fraction_theta_full 0.991
_diffrn_measured_fraction_theta_max 0.991
_diffrn_measurement_device_type  'Siemens SMART CCD area detector'
_diffrn_measurement_method       'phi and omega scans'
_diffrn_radiation_monochromator  graphite
_diffrn_radiation_source         'fine-focus sealed tube'
_diffrn_radiation_type           MoK\a
_diffrn_radiation_wavelength     0.71073
_diffrn_reflns_av_R_equivalents  0.0846
_diffrn_reflns_av_sigmaI/netI    0.0988
_diffrn_reflns_limit_h_max       14
_diffrn_reflns_limit_h_min       -14
_diffrn_reflns_limit_k_max       6
_diffrn_reflns_limit_k_min       -6
_diffrn_reflns_limit_l_max       18
_diffrn_reflns_limit_l_min       -15
_diffrn_reflns_number            5541
_diffrn_reflns_theta_full        25.02
_diffrn_reflns_theta_max         25.02
_diffrn_reflns_theta_min         1.34
_exptl_absorpt_coefficient_mu    0.138
_exptl_absorpt_correction_T_max  0.9863
_exptl_absorpt_correction_T_min  0.9428
_exptl_absorpt_correction_type   multi-scan
_exptl_absorpt_process_details   'SADABS (Sheldrick, 1996)'
_exptl_crystal_colour            colorless
_exptl_crystal_density_diffrn    1.123
_exptl_crystal_density_method    'not measured'
_exptl_crystal_description       block
_exptl_crystal_F_000             400
_exptl_crystal_size_max          0.43
_exptl_crystal_size_mid          0.11
_exptl_crystal_size_min          0.10
_refine_diff_density_max         0.283
_refine_diff_density_min         -0.230
_refine_diff_density_rms         0.046
_refine_ls_abs_structure_details 'Flack H D (1983), Acta Cryst. A39, 876-881'
_refine_ls_abs_structure_Flack   -0.17(16)
_refine_ls_extinction_method     none
_refine_ls_goodness_of_fit_ref   0.890
_refine_ls_hydrogen_treatment    constr
_refine_ls_matrix_type           full
_refine_ls_number_parameters     238
_refine_ls_number_reflns         3576
_refine_ls_number_restraints     1
_refine_ls_restrained_S_all      0.889
_refine_ls_R_factor_all          0.0877
_refine_ls_R_factor_gt           0.0658
_refine_ls_shift/su_max          0.000
_refine_ls_shift/su_mean         0.000
_refine_ls_structure_factor_coef Fsqd
_refine_ls_weighting_details
'calc w=1/[σ²(Fo²)+(0.1052P)²+0.0000P] where P=(Fo²+2Fc²)/3'
_refine_ls_weighting_scheme      calc
_refine_ls_wR_factor_gt          0.1567
_refine_ls_wR_factor_ref         0.1697
_reflns_number_gt                2596
_reflns_number_total             3576
_reflns_threshold_expression     >2sigma(I)
_cod_data_source_file            jo7b01326_si_003.cif
_cod_data_source_block           090909a
_cod_depositor_comments
;
The following automatic conversions were performed:

'_symmetry_cell_setting' value 'Monoclinic' changed to 'monoclinic'
according to
/home/data/users/saulius/crontab/automatic-downloads/rss-feeds/ACS/lib/dictionaries/cif_core.dic
dictionary named 'cif_core.dic' version 2.4.2 from 2011-04-26.

'_geom_bond_publ_flag' value 'Y' changed to 'y' according to
/home/data/users/saulius/crontab/automatic-downloads/rss-feeds/ACS/lib/dictionaries/cif_core.dic
dictionary named 'cif_core.dic' version 2.4.2 from 2011-04-26 (4
times).

'_geom_angle_publ_flag' value 'Y' changed to 'y' according to
/home/data/users/saulius/crontab/automatic-downloads/rss-feeds/ACS/lib/dictionaries/cif_core.dic
dictionary named 'cif_core.dic' version 2.4.2 from 2011-04-26 (6
times).

Automatic conversion script
Id: cif_fix_values 4973 2017-02-22 13:04:09Z antanas 

 Adding full bibliography for 4033038--4033039.cif.
;
_cod_original_sg_symbol_H-M      P2(1)
_cod_database_code               4033039
loop_
_symmetry_equiv_pos_as_xyz
'x, y, z'
'-x, y+1/2, -z'
loop_
_atom_site_label
_atom_site_type_symbol
_atom_site_fract_x
_atom_site_fract_y
_atom_site_fract_z
_atom_site_U_iso_or_equiv
_atom_site_adp_type
_atom_site_occupancy
_atom_site_symmetry_multiplicity
_atom_site_calc_flag
_atom_site_refinement_flags
P1 P 0.14134(8) 0.32764(18) 0.12780(6) 0.0440(3) Uani 1 1 d .
O1 O 0.2011(2) 0.2676(5) 0.22583(18) 0.0495(7) Uani 1 1 d .
O2 O 0.1092(2) 0.5709(5) 0.11455(18) 0.0539(8) Uani 1 1 d .
C1 C 0.2811(3) 0.3635(8) 0.3776(3) 0.0513(11) Uani 1 1 d .
H1 H 0.3316 0.2327 0.3810 0.062 Uiso 1 1 calc R
C2 C 0.2606(3) 0.4484(9) 0.2817(3) 0.0494(10) Uani 1 1 d .
H2 H 0.2140 0.5856 0.2776 0.059 Uiso 1 1 calc R
C3 C 0.3653(4) 0.5136(9) 0.2527(3) 0.0604(13) Uani 1 1 d .
H3A H 0.3492 0.5651 0.1918 0.072 Uiso 1 1 calc R
H3B H 0.4119 0.3788 0.2556 0.072 Uiso 1 1 calc R
C4 C 0.4259(4) 0.7041(10) 0.3099(3) 0.0736(15) Uani 1 1 d .
H4 H 0.3776 0.8387 0.3045 0.088 Uiso 1 1 calc R
C5 C 0.4456(4) 0.6286(13) 0.4061(3) 0.0831(17) Uani 1 1 d .
H5A H 0.4964 0.5004 0.4142 0.100 Uiso 1 1 calc R
H5B H 0.4786 0.7548 0.4430 0.100 Uiso 1 1 calc R
C6 C 0.3419(4) 0.5571(10) 0.4352(3) 0.0694(14) Uani 1 1 d .
H6A H 0.2942 0.6901 0.4329 0.083 Uiso 1 1 calc R
H6B H 0.3590 0.5049 0.4959 0.083 Uiso 1 1 calc R
C7 C 0.1778(4) 0.2749(10) 0.4090(3) 0.0665(14) Uani 1 1 d .
H7 H 0.1455 0.1554 0.3672 0.080 Uiso 1 1 calc R
C8 C 0.0910(5) 0.4614(15) 0.4086(4) 0.104(2) Uani 1 1 d .
H8A H 0.0268 0.3938 0.4239 0.157 Uiso 1 1 calc R
H8B H 0.0731 0.5286 0.3508 0.157 Uiso 1 1 calc R
H8C H 0.1187 0.5787 0.4508 0.157 Uiso 1 1 calc R
C9 C 0.2060(5) 0.1607(12) 0.4997(3) 0.0865(18) Uani 1 1 d .
H9A H 0.2317 0.2756 0.5435 0.130 Uiso 1 1 calc R
H9B H 0.2620 0.0472 0.4992 0.130 Uiso 1 1 calc R
H9C H 0.1422 0.0876 0.5134 0.130 Uiso 1 1 calc R
C10 C 0.5316(5) 0.7791(15) 0.2790(4) 0.113(3) Uani 1 1 d .
H10A H 0.5812 0.6511 0.2838 0.170 Uiso 1 1 calc R
H10B H 0.5649 0.9037 0.3153 0.170 Uiso 1 1 calc R
H10C H 0.5143 0.8289 0.2186 0.170 Uiso 1 1 calc R
C11 C 0.2347(3) 0.2350(7) 0.0575(3) 0.0445(10) Uani 1 1 d .
C12 C 0.2528(4) 0.3793(9) -0.0106(3) 0.0615(14) Uani 1 1 d .
H12 H 0.2167 0.5200 -0.0204 0.074 Uiso 1 1 calc R
C13 C 0.3260(4) 0.3096(13) -0.0641(3) 0.0790(15) Uani 1 1 d .
H13 H 0.3387 0.4050 -0.1097 0.095 Uiso 1 1 calc R
C14 C 0.3790(4) 0.1029(11) -0.0502(4) 0.0762(15) Uani 1 1 d .
H14 H 0.4277 0.0581 -0.0859 0.091 Uiso 1 1 calc R
C15 C 0.3601(4) -0.0387(11) 0.0170(4) 0.0776(15) Uani 1 1 d .
H15 H 0.3964 -0.1791 0.0267 0.093 Uiso 1 1 calc R
C16 C 0.2876(4) 0.0258(9) 0.0701(3) 0.0652(13) Uani 1 1 d .
H16 H 0.2744 -0.0724 0.1146 0.078 Uiso 1 1 calc R
C17 C 0.0306(3) 0.1248(8) 0.1089(3) 0.0511(10) Uani 1 1 d .
H17A H -0.0110 0.1479 0.0498 0.061 Uiso 1 1 calc R
H17B H 0.0603 -0.0303 0.1117 0.061 Uiso 1 1 calc R
C18 C -0.0457(3) 0.1452(8) 0.1747(3) 0.0490(10) Uani 1 1 d .
C19 C -0.1144(4) 0.3305(10) 0.1742(3) 0.0668(12) Uani 1 1 d .
H19 H -0.1153 0.4478 0.1329 0.080 Uiso 1 1 calc R
C20 C -0.1828(4) 0.3417(13) 0.2360(4) 0.0828(16) Uani 1 1 d .
H20 H -0.2284 0.4684 0.2363 0.099 Uiso 1 1 calc R
C21 C -0.1837(5) 0.1675(13) 0.2966(4) 0.0861(18) Uani 1 1 d .
H21 H -0.2302 0.1752 0.3371 0.103 Uiso 1 1 calc R
C22 C -0.1159(5) -0.0153(12) 0.2966(4) 0.0910(19) Uani 1 1 d .
H22 H -0.1155 -0.1324 0.3379 0.109 Uiso 1 1 calc R
C23 C -0.0479(4) -0.0298(10) 0.2365(3) 0.0689(13) Uani 1 1 d .
H23 H -0.0028 -0.1576 0.2369 0.083 Uiso 1 1 calc R
loop_
_atom_type_symbol
_atom_type_description
_atom_type_scat_dispersion_real
_atom_type_scat_dispersion_imag
_atom_type_scat_source
C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4'
H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4'
O O 0.0106 0.0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4'
N N 0.0061 0.0033 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4'
P P 0.1023 0.0942 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4'
loop_
_geom_angle_atom_site_label_1
_geom_angle_atom_site_label_2
_geom_angle_atom_site_label_3
_geom_angle
_geom_angle_publ_flag
O2 P1 O1 114.13(15) y
O2 P1 C17 115.1(2) y
O1 P1 C17 102.76(18) y
O2 P1 C11 112.96(18) y
O1 P1 C11 105.23(17) y
C17 P1 C11 105.6(2) y
C2 O1 P1 119.8(3) ?
C2 C1 C6 107.3(4) ?
C2 C1 C7 114.1(3) ?
C6 C1 C7 114.2(4) ?
C2 C1 H1 106.9 ?
C6 C1 H1 106.9 ?
C7 C1 H1 106.9 ?
O1 C2 C3 112.1(3) ?
O1 C2 C1 108.2(4) ?
C3 C2 C1 111.6(3) ?
O1 C2 H2 108.3 ?
C3 C2 H2 108.3 ?
C1 C2 H2 108.3 ?
C2 C3 C4 111.9(4) ?
C2 C3 H3A 109.2 ?
C4 C3 H3A 109.2 ?
C2 C3 H3B 109.2 ?
C4 C3 H3B 109.2 ?
H3A C3 H3B 107.9 ?
C5 C4 C3 109.2(5) ?
C5 C4 C10 112.9(4) ?
C3 C4 C10 112.6(5) ?
C5 C4 H4 107.3 ?
C3 C4 H4 107.3 ?
C10 C4 H4 107.3 ?
C6 C5 C4 112.2(4) ?
C6 C5 H5A 109.2 ?
C4 C5 H5A 109.2 ?
C6 C5 H5B 109.2 ?
C4 C5 H5B 109.2 ?
H5A C5 H5B 107.9 ?
C5 C6 C1 112.8(4) ?
C5 C6 H6A 109.0 ?
C1 C6 H6A 109.0 ?
C5 C6 H6B 109.0 ?
C1 C6 H6B 109.0 ?
H6A C6 H6B 107.8 ?
C8 C7 C9 110.6(4) ?
C8 C7 C1 113.2(5) ?
C9 C7 C1 111.5(4) ?
C8 C7 H7 107.0 ?
C9 C7 H7 107.0 ?
C1 C7 H7 107.0 ?
C7 C8 H8A 109.5 ?
C7 C8 H8B 109.5 ?
H8A C8 H8B 109.5 ?
C7 C8 H8C 109.5 ?
H8A C8 H8C 109.5 ?
H8B C8 H8C 109.5 ?
C7 C9 H9A 109.5 ?
C7 C9 H9B 109.5 ?
H9A C9 H9B 109.5 ?
C7 C9 H9C 109.5 ?
H9A C9 H9C 109.5 ?
H9B C9 H9C 109.5 ?
C4 C10 H10A 109.5 ?
C4 C10 H10B 109.5 ?
H10A C10 H10B 109.5 ?
C4 C10 H10C 109.5 ?
H10A C10 H10C 109.5 ?
H10B C10 H10C 109.5 ?
C16 C11 C12 119.6(4) ?
C16 C11 P1 121.4(3) ?
C12 C11 P1 119.0(3) ?
C11 C12 C13 119.1(5) ?
C11 C12 H12 120.5 ?
C13 C12 H12 120.5 ?
C14 C13 C12 120.7(5) ?
C14 C13 H13 119.7 ?
C12 C13 H13 119.7 ?
C13 C14 C15 119.7(5) ?
C13 C14 H14 120.2 ?
C15 C14 H14 120.2 ?
C14 C15 C16 120.5(6) ?
C14 C15 H15 119.7 ?
C16 C15 H15 119.7 ?
C11 C16 C15 120.4(5) ?
C11 C16 H16 119.8 ?
C15 C16 H16 119.8 ?
C18 C17 P1 113.5(3) ?
C18 C17 H17A 108.9 ?
P1 C17 H17A 108.9 ?
C18 C17 H17B 108.9 ?
P1 C17 H17B 108.9 ?
H17A C17 H17B 107.7 ?
C19 C18 C23 118.7(4) ?
C19 C18 C17 121.7(4) ?
C23 C18 C17 119.6(4) ?
C18 C19 C20 119.6(5) ?
C18 C19 H19 120.2 ?
C20 C19 H19 120.2 ?
C21 C20 C19 120.9(6) ?
C21 C20 H20 119.6 ?
C19 C20 H20 119.6 ?
C22 C21 C20 119.3(5) ?
C22 C21 H21 120.4 ?
C20 C21 H21 120.4 ?
C21 C22 C23 120.8(5) ?
C21 C22 H22 119.6 ?
C23 C22 H22 119.6 ?
C22 C23 C18 120.7(5) ?
C22 C23 H23 119.6 ?
C18 C23 H23 119.6 ?
loop_
_geom_bond_atom_site_label_1
_geom_bond_atom_site_label_2
_geom_bond_distance
_geom_bond_publ_flag
P1 O2 1.470(3) y
P1 O1 1.595(3) y
P1 C17 1.796(4) y
P1 C11 1.814(4) y
O1 C2 1.467(5) ?
C1 C2 1.533(5) ?
C1 C6 1.540(6) ?
C1 C7 1.548(6) ?
C1 H1 0.9800 ?
C2 C3 1.507(6) ?
C2 H2 0.9800 ?
C3 C4 1.524(7) ?
C3 H3A 0.9700 ?
C3 H3B 0.9700 ?
C4 C5 1.522(7) ?
C4 C10 1.546(7) ?
C4 H4 0.9800 ?
C5 C6 1.504(7) ?
C5 H5A 0.9700 ?
C5 H5B 0.9700 ?
C6 H6A 0.9700 ?
C6 H6B 0.9700 ?
C7 C8 1.529(8) ?
C7 C9 1.528(7) ?
C7 H7 0.9800 ?
C8 H8A 0.9600 ?
C8 H8B 0.9600 ?
C8 H8C 0.9600 ?
C9 H9A 0.9600 ?
C9 H9B 0.9600 ?
C9 H9C 0.9600 ?
C10 H10A 0.9600 ?
C10 H10B 0.9600 ?
C10 H10C 0.9600 ?
C11 C16 1.377(6) ?
C11 C12 1.394(6) ?
C12 C13 1.400(7) ?
C12 H12 0.9300 ?
C13 C14 1.366(8) ?
C13 H13 0.9300 ?
C14 C15 1.377(8) ?
C14 H14 0.9300 ?
C15 C16 1.380(7) ?
C15 H15 0.9300 ?
C16 H16 0.9300 ?
C17 C18 1.519(6) ?
C17 H17A 0.9700 ?
C17 H17B 0.9700 ?
C18 C19 1.374(6) ?
C18 C23 1.396(6) ?
C19 C20 1.395(7) ?
C19 H19 0.9300 ?
C20 C21 1.377(9) ?
C20 H20 0.9300 ?
C21 C22 1.356(9) ?
C21 H21 0.9300 ?
C22 C23 1.370(7) ?
C22 H22 0.9300 ?
C23 H23 0.9300 ?
