#------------------------------------------------------------------------------
#$Date: 2017-12-11 01:28:22 +0200 (Mon, 11 Dec 2017) $
#$Revision: 204147 $
#$URL: file:///home/coder/svn-repositories/cod/cif/4/12/15/4121565.cif $
#------------------------------------------------------------------------------
#
# This file is available in the Crystallography Open Database (COD),
# http://www.crystallography.net/
#
# All data on this site have been placed in the public domain by the
# contributors.
#
data_4121565
loop_
_publ_author_name
'Hu, Xirui'
'Maimone, Thomas J.'
_publ_section_title
;
 Four-Step Synthesis of the Antimalarial Cardamom Peroxide via an Oxygen
 Stitching Strategy.
;
_journal_issue                   14
_journal_name_full               'Journal of the American Chemical Society'
_journal_page_first              5287
_journal_page_last               5290
_journal_paper_doi               10.1021/ja502208z
_journal_volume                  136
_journal_year                    2014
_chemical_absolute_configuration ad
_chemical_formula_sum            'C20 H28 O6'
_chemical_formula_weight         364.42
_chemical_name_common            XH_54_SPS
_chemical_name_systematic
; 
 maimone15 
;
_space_group.centring_type       P
_space_group_crystal_system      orthorhombic
_space_group_IT_number           19
_space_group_name_Hall           'P 2ac 2ab'
_space_group_name_H-M_alt        'P 21 21 21'
_symmetry_space_group_name_Hall  'P 2ac 2ab'
_symmetry_space_group_name_H-M   'P 21 21 21'
_atom_sites_solution_hydrogens   geom
_atom_sites_solution_primary     iterative
_atom_sites_solution_secondary   difmap
_audit_creation_method           SHELXL-2013
_cell_angle_alpha                90
_cell_angle_beta                 90
_cell_angle_gamma                90
_cell_formula_units_Z            4
_cell_length_a                   6.4231(5)
_cell_length_b                   13.8311(9)
_cell_length_c                   20.3077(14)
_cell_measurement_reflns_used    9230
_cell_measurement_temperature    100(2)
_cell_measurement_theta_max      68.23
_cell_measurement_theta_min      3.87
_cell_volume                     1804.1(2)
_computing_cell_refinement       'Bruker SAINT'
_computing_data_collection       'Bruker APEX2'
_computing_data_reduction        'Bruker SAINT'
_computing_molecular_graphics    ORTEP-32
_computing_publication_material  WinGX
_computing_structure_refinement  SHELXL-2013
_computing_structure_solution    SHELXT
_diffrn_ambient_temperature      100(2)
_diffrn_detector_area_resol_mean 8.366
_diffrn_measured_fraction_theta_full 1.000
_diffrn_measured_fraction_theta_max 0.997
_diffrn_measurement_device_type  'Bruker APEX-II CCD'
_diffrn_measurement_method       'phi and omega scans'
_diffrn_radiation_type           CuK\a
_diffrn_radiation_wavelength     1.54178
_diffrn_reflns_av_R_equivalents  0.0290
_diffrn_reflns_av_unetI/netI     0.0142
_diffrn_reflns_Laue_measured_fraction_full 1.000
_diffrn_reflns_Laue_measured_fraction_max 0.997
_diffrn_refln_scan_rate          10
_diffrn_refln_scan_width         1.0
_diffrn_reflns_limit_h_max       7
_diffrn_reflns_limit_h_min       -7
_diffrn_reflns_limit_k_max       16
_diffrn_reflns_limit_k_min       -16
_diffrn_reflns_limit_l_max       24
_diffrn_reflns_limit_l_min       -24
_diffrn_reflns_number            27487
_diffrn_reflns_point_group_measured_fraction_full 1.000
_diffrn_reflns_point_group_measured_fraction_max 0.996
_diffrn_reflns_theta_full        67.000
_diffrn_reflns_theta_max         68.463
_diffrn_reflns_theta_min         3.867
_diffrn_source                   'microfocus rotating anode'
_exptl_absorpt_coefficient_mu    0.807
_exptl_absorpt_correction_T_max  0.929
_exptl_absorpt_correction_T_min  0.846
_exptl_absorpt_correction_type   multi-scan
_exptl_absorpt_process_details   SADABS
_exptl_crystal_colour            colorless
_exptl_crystal_density_diffrn    1.342
_exptl_crystal_description       plate
_exptl_crystal_F_000             784
_exptl_crystal_size_max          0.060
_exptl_crystal_size_mid          0.040
_exptl_crystal_size_min          0.030
_refine_diff_density_max         0.518
_refine_diff_density_min         -0.243
_refine_diff_density_rms         0.113
_refine_ls_abs_structure_details
; 
 Flack x determined using 1331 quotients [(I+)-(I-)]/[(I+)+(I-)] 
 (Parsons and Flack (2004), Acta Cryst. A60, s61). 
;
_refine_ls_abs_structure_Flack   0.02(6)
_refine_ls_extinction_method     none
_refine_ls_goodness_of_fit_ref   1.104
_refine_ls_hydrogen_treatment    constr
_refine_ls_matrix_type           full
_refine_ls_number_parameters     259
_refine_ls_number_reflns         3318
_refine_ls_number_restraints     0
_refine_ls_restrained_S_all      1.104
_refine_ls_R_factor_all          0.0725
_refine_ls_R_factor_gt           0.0714
_refine_ls_shift/su_max          0.001
_refine_ls_shift/su_mean         0.000
_refine_ls_structure_factor_coef Fsqd
_refine_ls_weighting_details
'w=1/[σ²(Fo²)+(0.1351P)²+0.6243P] where P=(Fo²+2Fc²)/3'
_refine_ls_weighting_scheme      calc
_refine_ls_wR_factor_gt          0.1882
_refine_ls_wR_factor_ref         0.1901
_reflns_Friedel_coverage         0.716
_reflns_Friedel_fraction_full    1.000
_reflns_Friedel_fraction_max     0.994
_reflns_number_gt                3231
_reflns_number_total             3318
_reflns_threshold_expression     'I > 2σ(I)'
_cod_data_source_file            ja502208z_si_002.cif
_cod_data_source_block           maimone15
_cod_depositor_comments
;Adding full bibliography for 4121564--4121567.cif.

The following automatic conversions were performed:

'_space_group.centring_type' value 'primitive' was replaced with the
value 'P' as specified in the replacement file
'/home/antanas/src/cod-tools/trunk/data/replacement-values/replacement_values.lst'.

Automatic conversion script
Id: cif_fix_values 5642 2017-10-24 12:04:52Z antanas 
;
_cod_database_code               4121565
#BEGIN Tags that were not found in dictionaries:
_shelx_space_group_comment
; 
The symmetry employed for this shelxl refinement is uniquely defined 
by the following loop, which should always be used as a source of 
symmetry information in preference to the above space-group names. 
They are only intended as comments. 
;
_shelx_estimated_absorpt_t_min   0.953
_shelx_estimated_absorpt_t_max   0.976
_shelxl_version_number           2013-4
#END Tags that were not found in dictionaries
loop_
_space_group_symop_operation_xyz
'x, y, z'
'-x+1/2, -y, z+1/2'
'-x, y+1/2, -z+1/2'
'x+1/2, -y+1/2, -z'
loop_
_atom_site_label
_atom_site_type_symbol
_atom_site_fract_x
_atom_site_fract_y
_atom_site_fract_z
_atom_site_U_iso_or_equiv
_atom_site_adp_type
_atom_site_occupancy
_atom_site_site_symmetry_order
_atom_site_calc_flag
_atom_site_refinement_flags_posn
_atom_site_refinement_flags_adp
_atom_site_refinement_flags_occupancy
_atom_site_disorder_assembly
_atom_site_disorder_group
C1 C -0.2499(9) 0.4845(3) 0.5749(2) 0.0572(13) Uani 1 1 d . . . . .
H1 H -0.3997 0.4652 0.5722 0.069 Uiso 1 1 calc R U . A 1
C2 C -0.2206(8) 0.5938(4) 0.5761(3) 0.0618(15) Uani 1 1 d . . . . .
H2A H -0.3486 0.6248 0.5590 0.074 Uiso 1 1 calc R U . . .
H2B H -0.2022 0.6149 0.6223 0.074 Uiso 1 1 calc R U . . .
C3 C -0.0406(8) 0.6277(3) 0.5369(3) 0.0560(13) Uani 1 1 d . . . . .
H3 H -0.0065 0.6978 0.5422 0.067 Uiso 1 1 calc R U . . .
C4 C -0.0519(8) 0.5921(3) 0.4647(2) 0.0459(11) Uani 1 1 d . . . . .
C5 C 0.0469(6) 0.4970(3) 0.49157(18) 0.0350(8) Uani 1 1 d . . . . .
H5 H 0.1489 0.4649 0.4615 0.042 Uiso 1 1 calc R U . . .
C6 C -0.1109(6) 0.4295(3) 0.52406(18) 0.0344(8) Uani 1 1 d . . . . .
C7 C 0.0060(6) 0.3430(3) 0.55610(17) 0.0313(7) Uani 1 1 d . . . . .
C8 C -0.1241(7) 0.2695(3) 0.59367(19) 0.0366(9) Uani 1 1 d . . . . .
H8A H -0.0503 0.2067 0.5931 0.044 Uiso 1 1 calc R U . . .
H8B H -0.2579 0.2607 0.5702 0.044 Uiso 1 1 calc R U . . .
C9 C -0.1707(7) 0.2966(3) 0.66568(18) 0.0342(8) Uani 1 1 d . . . . .
C10 C 0.0276(7) 0.3022(3) 0.7096(2) 0.0402(9) Uani 1 1 d . . . . .
C11 C 0.0075(8) 0.2582(4) 0.7791(2) 0.0544(12) Uani 1 1 d . . . . .
H11A H 0.1279 0.2151 0.7871 0.065 Uiso 1 1 calc R U . . .
H11B H 0.0133 0.3110 0.8120 0.065 Uiso 1 1 calc R U . . .
C12 C -0.1894(7) 0.2019(3) 0.7890(2) 0.0443(10) Uani 1 1 d . . . . .
H12 H -0.2037 0.1694 0.8328 0.053 Uiso 1 1 calc R U . . .
C13 C -0.2384(7) 0.1372(3) 0.7277(2) 0.0432(9) Uani 1 1 d . . . . .
C14 C -0.3320(6) 0.2321(3) 0.69718(19) 0.0392(9) Uani 1 1 d . . . . .
H14 H -0.4604 0.2220 0.6702 0.047 Uiso 1 1 calc R U . . .
C15 C 0.1445(8) 0.5580(3) 0.5481(2) 0.0460(10) Uani 1 1 d . . . . .
H15A H 0.1447 0.5257 0.5916 0.055 Uiso 1 1 calc R U . . .
H15B H 0.2825 0.5860 0.5376 0.055 Uiso 1 1 calc R U . . .
C16 C -0.3733(7) 0.2666(4) 0.7685(2) 0.0466(10) Uani 1 1 d . . . . .
H16A H -0.3494 0.3366 0.7756 0.056 Uiso 1 1 calc R U . . .
H16B H -0.5093 0.2460 0.7867 0.056 Uiso 1 1 calc R U . . .
C17 C 0.1038(10) 0.6436(4) 0.4195(3) 0.0670(16) Uani 1 1 d . . . . .
H17A H 0.1154 0.6082 0.3779 0.100 Uiso 1 1 calc R U . . .
H17B H 0.2403 0.6461 0.4410 0.100 Uiso 1 1 calc R U . . .
H17C H 0.0552 0.7095 0.4108 0.100 Uiso 1 1 calc R U . . .
C18 C -0.2628(8) 0.5900(3) 0.4297(2) 0.0504(11) Uani 1 1 d . . . . .
H18A H -0.3057 0.6561 0.4190 0.076 Uiso 1 1 calc R U . . .
H18B H -0.3669 0.5602 0.4585 0.076 Uiso 1 1 calc R U . . .
H18C H -0.2510 0.5522 0.3890 0.076 Uiso 1 1 calc R U . . .
C19 C -0.0595(10) 0.0840(4) 0.6950(3) 0.0618(14) Uani 1 1 d . . . . .
H19A H -0.0128 0.0311 0.7235 0.093 Uiso 1 1 calc R U . . .
H19B H 0.0561 0.1290 0.6875 0.093 Uiso 1 1 calc R U . . .
H19C H -0.1061 0.0576 0.6527 0.093 Uiso 1 1 calc R U . . .
C20 C -0.4119(10) 0.0642(4) 0.7423(3) 0.0613(14) Uani 1 1 d . . . . .
H20A H -0.4630 0.0367 0.7009 0.092 Uiso 1 1 calc R U . . .
H20B H -0.5265 0.0968 0.7651 0.092 Uiso 1 1 calc R U . . .
H20C H -0.3572 0.0123 0.7703 0.092 Uiso 1 1 calc R U . . .
O1 O -0.2850(10) 0.3884(5) 0.6697(3) 0.0378(16) Uani 0.674(10) 1 d . . P B 1
O2 O -0.1556(7) 0.4647(3) 0.6426(2) 0.0348(13) Uani 0.674(10) 1 d . . P B 1
O1A O -0.193(3) 0.4011(12) 0.6621(8) 0.047(4) Uani 0.326(10) 1 d . . P B 2
O2A O -0.3725(13) 0.4104(6) 0.6188(4) 0.039(3) Uani 0.326(10) 1 d . . P B 2
O3 O -0.2569(4) 0.3890(2) 0.47868(14) 0.0402(7) Uani 1 1 d . . . . .
O4 O -0.1372(5) 0.3407(2) 0.42696(15) 0.0489(8) Uani 1 1 d . . . . .
H4 H -0.1538 0.2806 0.4299 0.073 Uiso 1 1 calc R U . . .
O5 O 0.1882(4) 0.33279(19) 0.54601(14) 0.0392(7) Uani 1 1 d . . . . .
O6 O 0.1836(5) 0.3400(3) 0.69101(16) 0.0506(8) Uani 1 1 d . . . . .
loop_
_atom_type_symbol
_atom_type_description
_atom_type_scat_dispersion_real
_atom_type_scat_dispersion_imag
_atom_type_scat_source
C C 0.0181 0.0091 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4'
H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4'
O O 0.0492 0.0322 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4'
loop_
_geom_angle_atom_site_label_1
_geom_angle_atom_site_label_2
_geom_angle_atom_site_label_3
_geom_angle
C2 C1 O2 96.6(4)
C2 C1 C6 115.0(4)
O2 C1 C6 106.3(4)
C2 C1 O2A 134.5(5)
C6 C1 O2A 110.1(4)
C2 C1 H1 112.6
O2 C1 H1 112.6
C6 C1 H1 112.6
C3 C2 C1 113.7(4)
C3 C2 H2A 108.8
C1 C2 H2A 108.8
C3 C2 H2B 108.8
C1 C2 H2B 108.8
H2A C2 H2B 107.7
C2 C3 C15 108.9(4)
C2 C3 C4 111.8(4)
C15 C3 C4 88.7(3)
C2 C3 H3 114.9
C15 C3 H3 114.9
C4 C3 H3 114.9
C18 C4 C17 107.9(4)
C18 C4 C3 119.2(4)
C17 C4 C3 112.8(4)
C18 C4 C5 120.4(3)
C17 C4 C5 109.6(4)
C3 C4 C5 85.3(3)
C6 C5 C15 106.3(3)
C6 C5 C4 113.4(3)
C15 C5 C4 88.0(3)
C6 C5 H5 115.3
C15 C5 H5 115.3
C4 C5 H5 115.3
O3 C6 C5 113.3(3)
O3 C6 C7 106.6(3)
C5 C6 C7 109.3(3)
O3 C6 C1 104.0(4)
C5 C6 C1 111.5(3)
C7 C6 C1 111.9(3)
O5 C7 C8 123.0(3)
O5 C7 C6 119.5(3)
C8 C7 C6 117.3(3)
C7 C8 C9 114.9(3)
C7 C8 H8A 108.5
C9 C8 H8A 108.5
C7 C8 H8B 108.5
C9 C8 H8B 108.5
H8A C8 H8B 107.5
O1A C9 C14 122.6(7)
O1 C9 C14 98.3(4)
O1A C9 C8 102.4(7)
O1 C9 C8 111.1(4)
C14 C9 C8 113.1(3)
O1A C9 C10 93.5(7)
O1 C9 C10 109.5(4)
C14 C9 C10 110.4(3)
C8 C9 C10 113.4(3)
O6 C10 C11 122.2(4)
O6 C10 C9 121.9(4)
C11 C10 C9 115.9(4)
C12 C11 C10 113.5(4)
C12 C11 H11A 108.9
C10 C11 H11A 108.9
C12 C11 H11B 108.9
C10 C11 H11B 108.9
H11A C11 H11B 107.7
C11 C12 C16 108.0(4)
C11 C12 C13 111.1(4)
C16 C12 C13 87.9(3)
C11 C12 H12 115.5
C16 C12 H12 115.5
C13 C12 H12 115.5
C19 C13 C20 108.4(4)
C19 C13 C12 118.3(4)
C20 C13 C12 111.7(4)
C19 C13 C14 121.4(3)
C20 C13 C14 110.4(4)
C12 C13 C14 85.0(3)
C9 C14 C16 109.4(4)
C9 C14 C13 113.5(3)
C16 C14 C13 87.3(3)
C9 C14 H14 114.6
C16 C14 H14 114.6
C13 C14 H14 114.6
C3 C15 C5 85.4(3)
C3 C15 H15A 114.4
C5 C15 H15A 114.4
C3 C15 H15B 114.4
C5 C15 H15B 114.4
H15A C15 H15B 111.5
C12 C16 C14 86.7(3)
C12 C16 H16A 114.2
C14 C16 H16A 114.2
C12 C16 H16B 114.2
C14 C16 H16B 114.2
H16A C16 H16B 111.4
C4 C17 H17A 109.5
C4 C17 H17B 109.5
H17A C17 H17B 109.5
C4 C17 H17C 109.5
H17A C17 H17C 109.5
H17B C17 H17C 109.5
C4 C18 H18A 109.5
C4 C18 H18B 109.5
H18A C18 H18B 109.5
C4 C18 H18C 109.5
H18A C18 H18C 109.5
H18B C18 H18C 109.5
C13 C19 H19A 109.5
C13 C19 H19B 109.5
H19A C19 H19B 109.5
C13 C19 H19C 109.5
H19A C19 H19C 109.5
H19B C19 H19C 109.5
C13 C20 H20A 109.5
C13 C20 H20B 109.5
H20A C20 H20B 109.5
C13 C20 H20C 109.5
H20A C20 H20C 109.5
H20B C20 H20C 109.5
O2 O1 C9 108.8(5)
O1 O2 C1 104.1(4)
C9 O1A O2A 101.3(10)
O1A O2A C1 90.3(8)
C6 O3 O4 107.3(3)
O3 O4 H4 109.5
loop_
_geom_bond_atom_site_label_1
_geom_bond_atom_site_label_2
_geom_bond_distance
C1 C2 1.524(7)
C1 O2 1.526(6)
C1 C6 1.562(5)
C1 O2A 1.570(10)
C1 H1 1.0000
C2 C3 1.480(8)
C2 H2A 0.9900
C2 H2B 0.9900
C3 C15 1.547(6)
C3 C4 1.548(6)
C3 H3 1.0000
C4 C18 1.531(6)
C4 C17 1.532(8)
C4 C5 1.558(5)
C5 C6 1.528(6)
C5 C15 1.556(5)
C5 H5 1.0000
C6 O3 1.429(5)
C6 C7 1.556(5)
C7 O5 1.196(5)
C7 C8 1.521(5)
C8 C9 1.539(5)
C8 H8A 0.9900
C8 H8B 0.9900
C9 O1A 1.455(17)
C9 O1 1.469(8)
C9 C14 1.510(6)
C9 C10 1.557(6)
C10 O6 1.192(5)
C10 C11 1.542(6)
C11 C12 1.499(7)
C11 H11A 0.9900
C11 H11B 0.9900
C12 C16 1.539(6)
C12 C13 1.565(6)
C12 H12 1.0000
C13 C19 1.518(7)
C13 C20 1.533(6)
C13 C14 1.571(6)
C14 C16 1.549(6)
C14 H14 1.0000
C15 H15A 0.9900
C15 H15B 0.9900
C16 H16A 0.9900
C16 H16B 0.9900
C17 H17A 0.9800
C17 H17B 0.9800
C17 H17C 0.9800
C18 H18A 0.9800
C18 H18B 0.9800
C18 H18C 0.9800
C19 H19A 0.9800
C19 H19B 0.9800
C19 H19C 0.9800
C20 H20A 0.9800
C20 H20B 0.9800
C20 H20C 0.9800
O1 O2 1.452(7)
O1A O2A 1.454(18)
O3 O4 1.463(4)
O4 H4 0.8400
