#------------------------------------------------------------------------------
#$Date: 2016-03-24 14:28:49 +0200 (Thu, 24 Mar 2016) $
#$Revision: 179665 $
#$URL: svn://www.crystallography.net/cod/cif/4/51/18/4511860.cif $
#------------------------------------------------------------------------------
#
# This file is available in the Crystallography Open Database (COD),
# http://www.crystallography.net/
#
# All data on this site have been placed in the public domain by the
# contributors.
#
data_4511860
loop_
_publ_author_name
'Miyake, Ryosuke'
'Nakagawa, Yuki'
'Hase, Mariko'
_publ_section_title
;
 Selective Thermal Elongation of Metal--Metal Distances in the
 Two-Dimensional Assembly of Ag(I) Ions Templated by Assembled Peptide
 Ligands
;
_journal_issue                   10
_journal_name_full               'Crystal Growth & Design'
_journal_page_first              4882
_journal_paper_doi               10.1021/cg5009347
_journal_volume                  14
_journal_year                    2014
_chemical_absolute_configuration ad
_chemical_formula_sum            'C7 H11 Ag2 N3 O5'
_chemical_formula_weight         432.93
_space_group_crystal_system      monoclinic
_space_group_IT_number           4
_space_group_name_Hall           'P 2yb'
_space_group_name_H-M_alt        'P 1 21 1'
_symmetry_space_group_name_Hall  'P 2yb'
_symmetry_space_group_name_H-M   'P 1 21 1'
_atom_sites_solution_hydrogens   geom
_cell_angle_alpha                90
_cell_angle_beta                 103.363(2)
_cell_angle_gamma                90
_cell_formula_units_Z            2
_cell_length_a                   4.8207(7)
_cell_length_b                   19.966(3)
_cell_length_c                   5.5008(7)
_cell_measurement_temperature    123
_cell_volume                     515.12(13)
_computing_cell_refinement       'SAINT V8.32B (Bruker AXS)'
_computing_data_collection       'Bruker SMART APEXII ULTRA'
_computing_data_reduction        'SAINT V8.32B (Bruker AXS)'
_computing_molecular_graphics    'XSHELL V6.3.1 (Bruker AXS)'
_computing_publication_material  'Generate Report (Bruker AXS)'
_computing_structure_refinement  'SHELXL-2013 (Sheldrick, 2013)'
_computing_structure_solution    'SHELXS-97 (Sheldrick, 1997)'
_diffrn_ambient_temperature      123
_diffrn_detector_area_resol_mean 8.333
_diffrn_measured_fraction_theta_full 0.991
_diffrn_measured_fraction_theta_max 0.991
_diffrn_measurement_device_type  'Bruker D8 goniometer'
_diffrn_measurement_method       'omega scans'
_diffrn_radiation_monochromator  'multilayered conforcal mirror'
_diffrn_radiation_type           MoK\a
_diffrn_radiation_wavelength     0.71073
_diffrn_reflns_av_R_equivalents  0.0183
_diffrn_reflns_limit_h_max       5
_diffrn_reflns_limit_h_min       -6
_diffrn_reflns_limit_k_max       23
_diffrn_reflns_limit_k_min       -27
_diffrn_reflns_limit_l_max       7
_diffrn_reflns_limit_l_min       -6
_diffrn_reflns_number            3475
_diffrn_reflns_theta_full        29.13
_diffrn_reflns_theta_max         29.13
_diffrn_reflns_theta_min         2.04
_diffrn_source                   'rotating-anode X-ray tube'
_diffrn_source_type              'Bruker Tourbo X-ray Source'
_exptl_absorpt_coefficient_mu    3.816
_exptl_absorpt_correction_T_max  0.96
_exptl_absorpt_correction_T_min  0.82
_exptl_absorpt_correction_type   empirical
_exptl_absorpt_process_details   'SADABS V2012/1 (Bruker AXS)'
_exptl_crystal_colour            colorless
_exptl_crystal_density_diffrn    2.791
_exptl_crystal_density_method    'not measured'
_exptl_crystal_description       plate
_exptl_crystal_F_000             416
_exptl_crystal_size_max          0.055
_exptl_crystal_size_mid          0.023
_exptl_crystal_size_min          0.010
_refine_diff_density_max         1.081
_refine_diff_density_min         -0.889
_refine_ls_abs_structure_details
;
Flack x determined using 850 quotients [(I+)-(I-)]/[(I+)+(I-)]
(Parsons and Flack (2004), Acta Cryst. A60, s61).
;
_refine_ls_abs_structure_Flack   0.02(3)
_refine_ls_extinction_method     none
_refine_ls_goodness_of_fit_ref   1.057
_refine_ls_hydrogen_treatment    constr
_refine_ls_matrix_type           full
_refine_ls_number_parameters     154
_refine_ls_number_reflns         2341
_refine_ls_number_restraints     1
_refine_ls_restrained_S_all      1.057
_refine_ls_R_factor_all          0.0259
_refine_ls_R_factor_gt           0.0239
_refine_ls_shift/su_max          0.001
_refine_ls_shift/su_mean         0.000
_refine_ls_structure_factor_coef Fsqd
_refine_ls_weighting_details
'w=1/[σ²(Fo²)+(0.0226P)²+0.5145P] where P=(Fo²+2Fc²)/3'
_refine_ls_weighting_scheme      calc
_refine_ls_wR_factor_gt          0.0540
_refine_ls_wR_factor_ref         0.0548
_reflns_number_gt                2226
_reflns_number_total             2341
_reflns_threshold_expression     'I > 2σ(I)'
_cod_data_source_file            cg5009347_si_001.cif
_cod_data_source_block           p21_123K
_cod_depositor_comments
'Adding full bibliography for 4511859--4511871.cif.'
_cod_original_cell_volume        515.12(12)
_cod_database_code               4511860
#BEGIN Tags that were not found in dictionaries:
#END Tags that were not found in dictionaries
loop_
_space_group_symop_operation_xyz
'x, y, z'
'-x, y+1/2, -z'
loop_
_atom_site_type_symbol
_atom_site_label
_atom_site_fract_x
_atom_site_fract_y
_atom_site_fract_z
_atom_site_U_iso_or_equiv
_atom_site_adp_type
_atom_site_calc_flag
_atom_site_refinement_flags_adp
_atom_site_refinement_flags_posn
_atom_site_occupancy
Ag Ag1 0.21340(9) 0.85794(2) 0.42615(8) 0.01630(11) Uani d . . 1
Ag Ag2 -0.44091(9) 0.86676(2) -0.00931(8) 0.01766(11) Uani d . . 1
C C1 -0.0223(13) 0.7561(3) 0.0223(11) 0.0135(12) Uani d . . 1
C C2 0.1410(14) 0.6945(3) 0.1417(12) 0.0160(12) Uani d . . 1
H H2A 0.0174 0.6545 0.1004 0.019 Uiso calc U R 1
H H2B 0.3097 0.6878 0.0704 0.019 Uiso calc U R 1
C C3 0.2386(12) 0.7007(3) 0.4245(11) 0.0126(12) Uani d . . 1
H H3 0.0676 0.7048 0.4974 0.015 Uiso calc U R 1
C C4 0.4059(12) 0.6375(3) 0.5287(11) 0.0112(11) Uani d . . 1
C C5 0.3891(13) 0.5249(3) 0.6941(12) 0.0136(12) Uani d . . 1
H H5 0.5687 0.5205 0.6338 0.016 Uiso calc U R 1
C C6 0.4711(15) 0.5256(3) 0.9803(13) 0.0149(13) Uani d . . 1
H H6A 0.5848 0.5663 1.0387 0.018 Uiso calc U R 1
H H6B 0.2962 0.5272 1.0455 0.018 Uiso calc U R 1
C C7 0.1978(12) 0.4648(3) 0.5929(12) 0.0126(11) Uani d . . 1
N N1 0.4197(11) 0.7604(3) 0.4921(10) 0.0124(10) Uani d . . 1
H H1A 0.5719 0.7588 0.3984 0.015 Uiso calc U R 1
H H1B 0.5134 0.7573 0.672 0.015 Uiso calc U R 1
N N2 0.2534(10) 0.5877(3) 0.5975(10) 0.0130(10) Uani d . . 1
H H2 0.0692 0.593 0.5841 0.016 Uiso calc U R 1
N N3 0.6384(12) 0.4655(3) 1.0779(10) 0.0161(11) Uani d . . 1
H H3A 0.7043 0.4709 1.2611 0.019 Uiso calc U R 1
H H3B 0.8106 0.4652 1.0086 0.019 Uiso calc U R 1
O O1 0.0601(10) 0.7894(3) -0.1369(9) 0.0240(11) Uani d . . 1
O O2 -0.2456(10) 0.7708(3) 0.1033(9) 0.0216(10) Uani d . . 1
O O3 0.6635(9) 0.6332(2) 0.5419(10) 0.0241(11) Uani d . . 1
O O4 0.2661(11) 0.4294(3) 0.4316(10) 0.0296(12) Uani d . . 1
O O5 -0.0206(9) 0.4563(2) 0.6812(9) 0.0190(10) Uani d . . 1
loop_
_atom_type_symbol
_atom_type_description
_atom_type_scat_dispersion_real
_atom_type_scat_dispersion_imag
_atom_type_scat_source
C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4'
H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4'
N N 0.0061 0.0033 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4'
O O 0.0106 0.0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4'
Ag Ag -0.8971 1.1015 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4'
loop_
_geom_angle_atom_site_label_1
_geom_angle_atom_site_label_2
_geom_angle_atom_site_label_3
_geom_angle_site_symmetry_1
_geom_angle_site_symmetry_3
_geom_angle
N1 Ag1 O5 . 2_556 173.42(19)
N1 Ag1 Ag2 . 1_656 76.71(14)
O5 Ag1 Ag2 2_556 1_656 107.93(13)
N1 Ag1 Ag2 . 1_655 83.00(14)
O5 Ag1 Ag2 2_556 1_655 90.61(12)
Ag2 Ag1 Ag2 1_656 1_655 118.66(2)
O2 Ag2 N3 . 2_556 173.4(2)
O2 Ag2 Ag1 . 1_454 109.08(14)
N3 Ag2 Ag1 2_556 1_454 76.79(14)
O2 Ag2 Ag1 . 1_455 90.25(12)
N3 Ag2 Ag1 2_556 1_455 84.15(15)
Ag1 Ag2 Ag1 1_454 1_455 118.66(2)
O1 C1 O2 . . 123.6(6)
O1 C1 C2 . . 121.4(6)
O2 C1 C2 . . 115.0(5)
C3 C2 C1 . . 112.4(5)
C3 C2 H2A . . 109.1
C1 C2 H2A . . 109.1
C3 C2 H2B . . 109.1
C1 C2 H2B . . 109.1
H2A C2 H2B . . 107.9
N1 C3 C2 . . 110.4(5)
N1 C3 C4 . . 110.0(5)
C2 C3 C4 . . 109.1(5)
N1 C3 H3 . . 109.1
C2 C3 H3 . . 109.1
C4 C3 H3 . . 109.1
O3 C4 N2 . . 122.9(6)
O3 C4 C3 . . 121.0(5)
N2 C4 C3 . . 116.1(5)
N2 C5 C6 . . 110.7(5)
N2 C5 C7 . . 111.0(5)
C6 C5 C7 . . 111.8(5)
N2 C5 H5 . . 107.7
C6 C5 H5 . . 107.7
C7 C5 H5 . . 107.7
N3 C6 C5 . . 110.8(5)
N3 C6 H6A . . 109.5
C5 C6 H6A . . 109.5
N3 C6 H6B . . 109.5
C5 C6 H6B . . 109.5
H6A C6 H6B . . 108.1
O4 C7 O5 . . 125.4(6)
O4 C7 C5 . . 118.0(5)
O5 C7 C5 . . 116.6(5)
C3 N1 Ag1 . . 117.4(4)
C3 N1 H1A . . 107.9
Ag1 N1 H1A . . 107.9
C3 N1 H1B . . 107.9
Ag1 N1 H1B . . 107.9
H1A N1 H1B . . 107.2
C4 N2 C5 . . 120.8(5)
C4 N2 H2 . . 119.6
C5 N2 H2 . . 119.6
C6 N3 Ag2 . 2_546 119.5(4)
C6 N3 H3A . . 107.5
Ag2 N3 H3A 2_546 . 107.5
C6 N3 H3B . . 107.5
Ag2 N3 H3B 2_546 . 107.5
H3A N3 H3B . . 107.0
C1 O2 Ag2 . . 116.4(4)
C7 O5 Ag1 . 2_546 110.8(4)
loop_
_geom_bond_atom_site_label_1
_geom_bond_atom_site_label_2
_geom_bond_site_symmetry_2
_geom_bond_distance
Ag1 N1 . 2.178(5)
Ag1 O5 2_556 2.194(5)
Ag1 Ag2 1_656 3.1717(7)
Ag1 Ag2 1_655 3.2235(6)
Ag2 O2 . 2.162(5)
Ag2 N3 2_556 2.183(6)
Ag2 Ag1 1_454 3.1717(7)
Ag2 Ag1 1_455 3.2235(6)
C1 O1 . 1.236(7)
C1 O2 . 1.291(7)
C1 C2 . 1.525(9)
C2 C3 . 1.523(9)
C2 H2A . 0.99
C2 H2B . 0.99
C3 N1 . 1.474(8)
C3 C4 . 1.534(8)
C3 H3 . 1.0
C4 O3 . 1.230(7)
C4 N2 . 1.342(8)
C5 N2 . 1.457(7)
C5 C6 . 1.532(9)
C5 C7 . 1.536(9)
C5 H5 . 1.0
C6 N3 . 1.477(9)
C6 H6A . 0.99
C6 H6B . 0.99
C7 O4 . 1.238(8)
C7 O5 . 1.269(7)
N1 H1A . 0.99
N1 H1B . 0.99
N2 H2 . 0.88
N3 Ag2 2_546 2.183(6)
N3 H3A . 0.99
N3 H3B . 0.99
O5 Ag1 2_546 2.194(5)
