#------------------------------------------------------------------------------ #$Date: 2019-12-11 11:13:32 +0200 (Wed, 11 Dec 2019) $ #$Revision: 244982 $ #$URL: file:///home/coder/svn-repositories/cod/cif/1/55/64/1556490.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/ # # All data on this site have been placed in the public domain by the # contributors. # data_1556490 loop_ _publ_author_name 'Naglav, D.' 'Tobey, B.' 'Dzialkowski, K.' 'Jansen, G.' 'Wolper, C.' 'Schulz, S.' _publ_section_title ; Insights into Molecular Beryllium-Silicon Bonds ; _journal_name_full Inorganics _journal_page_first 22 _journal_paper_doi 10.3390/inorganics5020022 _journal_volume 5 _journal_year 2017 _chemical_formula_sum 'C26 H70 Be2 Cl2 O2 Si8' _chemical_formula_weight 728.46 _space_group_IT_number 14 _space_group_name_Hall '-P 2yn' _space_group_name_H-M_alt 'P 1 21/n 1' _symmetry_cell_setting monoclinic _symmetry_space_group_name_H-M 'P 1 21/n 1' _atom_sites_solution_hydrogens geom _atom_sites_solution_primary direct _atom_sites_solution_secondary difmap _cell_angle_alpha 90.00 _cell_angle_beta 98.150(4) _cell_angle_gamma 90.00 _cell_formula_units_Z 2 _cell_length_a 10.3667(7) _cell_length_b 18.8628(12) _cell_length_c 11.3870(7) _cell_measurement_reflns_used 4730 _cell_measurement_temperature 100(1) _cell_measurement_theta_max 26.3 _cell_measurement_theta_min 2.25 _cell_volume 2204.2(2) _computing_cell_refinement 'BRUKER D8 KAPPA APEX 2 Vers. 3.0-2009' _computing_data_collection 'BRUKER D8 KAPPA APEX 2 Vers. 3.0-2009' _computing_data_reduction 'BRUKER D8 KAPPA APEX 2 Vers. 3.0-2009' _computing_molecular_graphics 'BRUKER AXS SHELXTL (c) 2008 / Vers. 2008/4' _computing_publication_material 'BRUKER AXS SHELXTL (c) 2008 / Vers. 2008/4' _computing_structure_refinement 'BRUKER AXS SHELXTL (c) 2008 / Vers. 2008/4' _computing_structure_solution 'BRUKER D8 KAPPA APEX 2 Vers. 3.0-2009' _diffrn_ambient_temperature 100(1) _diffrn_detector_area_resol_mean 512 _diffrn_measured_fraction_theta_full 0.988 _diffrn_measured_fraction_theta_max 0.988 _diffrn_measurement_device_type ; Bruker D8 KAPPA series II with APEX II area detector system ; _diffrn_measurement_method ; Data collection strategy APEX 2/COSMO ; _diffrn_radiation_monochromator 'Triumph Goebel mirror' _diffrn_radiation_source 'fine-focus sealed tube' _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength 0.71073 _diffrn_reflns_av_R_equivalents 0.1159 _diffrn_reflns_av_sigmaI/netI 0.1253 _diffrn_reflns_limit_h_max 9 _diffrn_reflns_limit_h_min -12 _diffrn_reflns_limit_k_max 23 _diffrn_reflns_limit_k_min -21 _diffrn_reflns_limit_l_max 14 _diffrn_reflns_limit_l_min -14 _diffrn_reflns_number 17848 _diffrn_reflns_theta_full 26.46 _diffrn_reflns_theta_max 26.46 _diffrn_reflns_theta_min 2.16 _exptl_absorpt_coefficient_mu 0.386 _exptl_absorpt_correction_T_max 0.75 _exptl_absorpt_correction_T_min 0.67 _exptl_absorpt_correction_type multi-scan _exptl_absorpt_process_details ; BRUKER AXS SMART APEX 2 Vers. 3.0-2009 R.H. Blessing, Acta Cryst. (1995) A51 33-38 ; _exptl_crystal_colour colourless _exptl_crystal_density_diffrn 1.098 _exptl_crystal_density_method 'not measured' _exptl_crystal_description prism _exptl_crystal_F_000 792 _exptl_crystal_size_max 0.07 _exptl_crystal_size_mid 0.05 _exptl_crystal_size_min 0.05 _refine_diff_density_max 0.451 _refine_diff_density_min -0.407 _refine_diff_density_rms 0.086 _refine_ls_extinction_method none _refine_ls_goodness_of_fit_ref 0.997 _refine_ls_hydrogen_treatment constr _refine_ls_matrix_type full _refine_ls_number_parameters 190 _refine_ls_number_reflns 4491 _refine_ls_number_restraints 0 _refine_ls_restrained_S_all 0.997 _refine_ls_R_factor_all 0.1191 _refine_ls_R_factor_gt 0.0564 _refine_ls_shift/su_max 0.000 _refine_ls_shift/su_mean 0.000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'calc w=1/[\s^2^(Fo^2^)+(0.0480P)^2^+0.0000P] where P=(Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_gt 0.1074 _refine_ls_wR_factor_ref 0.1242 _reflns_number_gt 2690 _reflns_number_total 4491 _reflns_threshold_expression >2sigma(I) _cod_data_source_file Inorganics-2017-5-22.cif _cod_data_source_block dnp_003_0m _cod_original_sg_symbol_H-M P21/n _cod_database_code 1556490 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x+1/2, y+1/2, -z+1/2' '-x, -y, -z' 'x-1/2, -y-1/2, z-1/2' loop_ _atom_site_label _atom_site_type_symbol _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_occupancy _atom_site_symmetry_multiplicity _atom_site_calc_flag _atom_site_refinement_flags _atom_site_disorder_assembly _atom_site_disorder_group Cl1 Cl -0.10582(8) 0.05957(5) 0.00040(8) 0.0166(2) Uani 1 1 d . . . Be1 Be 0.0992(4) 0.0500(3) 0.0300(4) 0.0155(10) Uani 1 1 d . . . Si1 Si 0.19892(9) 0.09265(6) 0.20282(9) 0.0142(2) Uani 1 1 d . . . Si11 Si 0.22900(10) 0.00410(6) 0.34788(9) 0.0180(3) Uani 1 1 d . . . Si12 Si 0.07075(10) 0.18070(6) 0.27394(9) 0.0183(3) Uani 1 1 d . . . Si13 Si 0.40584(9) 0.14376(6) 0.20406(9) 0.0181(3) Uani 1 1 d . . . C11 C 0.3623(4) -0.0576(2) 0.3175(4) 0.0326(11) Uani 1 1 d . . . H11A H 0.3683 -0.0972 0.3736 0.049 Uiso 1 1 calc R . . H11B H 0.4454 -0.0319 0.3267 0.049 Uiso 1 1 calc R . . H11C H 0.3429 -0.0758 0.2363 0.049 Uiso 1 1 calc R . . C12 C 0.0778(4) -0.0504(2) 0.3442(3) 0.0269(10) Uani 1 1 d . . . H12A H 0.0969 -0.0925 0.3940 0.040 Uiso 1 1 calc R . . H12B H 0.0473 -0.0650 0.2624 0.040 Uiso 1 1 calc R . . H12C H 0.0102 -0.0222 0.3742 0.040 Uiso 1 1 calc R . . C13 C 0.2681(4) 0.0376(2) 0.5042(3) 0.0284(10) Uani 1 1 d . . . H13A H 0.1953 0.0662 0.5241 0.043 Uiso 1 1 calc R . . H13B H 0.3470 0.0668 0.5114 0.043 Uiso 1 1 calc R . . H13C H 0.2825 -0.0027 0.5588 0.043 Uiso 1 1 calc R . . C21 C 0.0071(4) 0.2425(2) 0.1493(4) 0.0262(10) Uani 1 1 d . . . H21A H -0.0461 0.2158 0.0864 0.039 Uiso 1 1 calc R . . H21B H 0.0805 0.2645 0.1175 0.039 Uiso 1 1 calc R . . H21C H -0.0462 0.2795 0.1792 0.039 Uiso 1 1 calc R . . C22 C -0.0753(4) 0.1405(2) 0.3297(4) 0.0271(10) Uani 1 1 d . . . H22A H -0.1272 0.1780 0.3598 0.041 Uiso 1 1 calc R . . H22B H -0.0462 0.1069 0.3937 0.041 Uiso 1 1 calc R . . H22C H -0.1287 0.1155 0.2646 0.041 Uiso 1 1 calc R . . C23 C 0.1594(4) 0.2363(2) 0.3968(4) 0.0307(10) Uani 1 1 d . . . H23A H 0.2291 0.2629 0.3668 0.046 Uiso 1 1 calc R . . H23B H 0.1971 0.2055 0.4620 0.046 Uiso 1 1 calc R . . H23C H 0.0982 0.2695 0.4255 0.046 Uiso 1 1 calc R . . C31 C 0.3955(4) 0.2336(2) 0.1318(4) 0.0272(10) Uani 1 1 d . . . H31A H 0.3489 0.2663 0.1780 0.041 Uiso 1 1 calc R . . H31B H 0.3486 0.2298 0.0511 0.041 Uiso 1 1 calc R . . H31C H 0.4836 0.2517 0.1287 0.041 Uiso 1 1 calc R . . C32 C 0.5158(4) 0.0872(2) 0.1254(4) 0.0287(10) Uani 1 1 d . . . H32A H 0.6030 0.1083 0.1344 0.043 Uiso 1 1 calc R . . H32B H 0.4807 0.0843 0.0410 0.043 Uiso 1 1 calc R . . H32C H 0.5210 0.0395 0.1599 0.043 Uiso 1 1 calc R . . C33 C 0.4968(4) 0.1554(2) 0.3575(3) 0.0267(10) Uani 1 1 d . . . H33A H 0.5117 0.1089 0.3955 0.040 Uiso 1 1 calc R . . H33B H 0.4454 0.1849 0.4044 0.040 Uiso 1 1 calc R . . H33C H 0.5807 0.1783 0.3528 0.040 Uiso 1 1 calc R . . O1 O 0.1439(2) 0.08456(13) -0.0915(2) 0.0154(6) Uani 1 1 d . . . C96 C 0.2544(3) 0.0567(2) -0.1455(3) 0.0193(9) Uani 1 1 d . . . H96A H 0.2239 0.0231 -0.2103 0.023 Uiso 1 1 calc R . . H96B H 0.3172 0.0320 -0.0855 0.023 Uiso 1 1 calc R . . C97 C 0.3162(3) 0.1210(2) -0.1930(4) 0.0233(9) Uani 1 1 d . . . H97A H 0.3573 0.1090 -0.2638 0.028 Uiso 1 1 calc R . . H97B H 0.3825 0.1422 -0.1320 0.028 Uiso 1 1 calc R . . C98 C 0.2011(4) 0.1702(2) -0.2245(3) 0.0242(10) Uani 1 1 d . . . H98A H 0.2299 0.2201 -0.2284 0.029 Uiso 1 1 calc R . . H98B H 0.1497 0.1570 -0.3014 0.029 Uiso 1 1 calc R . . C99 C 0.1235(3) 0.1590(2) -0.1230(3) 0.0183(9) Uani 1 1 d . . . H99A H 0.1558 0.1901 -0.0551 0.022 Uiso 1 1 calc R . . H99B H 0.0299 0.1690 -0.1483 0.022 Uiso 1 1 calc R . . loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_23 _atom_site_aniso_U_13 _atom_site_aniso_U_12 Cl1 0.0137(4) 0.0153(5) 0.0205(5) -0.0011(4) 0.0013(3) 0.0009(4) Be1 0.014(2) 0.013(3) 0.020(3) -0.003(2) 0.0024(18) 0.000(2) Si1 0.0135(5) 0.0141(6) 0.0150(6) -0.0009(4) 0.0016(4) 0.0007(4) Si11 0.0183(6) 0.0191(6) 0.0158(6) 0.0011(5) -0.0006(4) 0.0008(5) Si12 0.0194(6) 0.0191(7) 0.0167(6) -0.0006(5) 0.0032(4) 0.0048(5) Si13 0.0146(5) 0.0200(7) 0.0195(6) -0.0026(5) 0.0014(4) -0.0016(4) C11 0.039(3) 0.028(3) 0.030(3) 0.001(2) 0.0022(19) 0.013(2) C12 0.033(2) 0.031(3) 0.015(2) 0.0078(19) -0.0017(16) -0.0113(19) C13 0.029(2) 0.038(3) 0.017(2) 0.0016(19) -0.0001(17) -0.0030(19) C21 0.031(2) 0.018(2) 0.032(3) 0.0022(18) 0.0127(18) 0.0101(18) C22 0.027(2) 0.028(3) 0.029(2) 0.0040(19) 0.0117(17) 0.0070(19) C23 0.032(2) 0.032(3) 0.029(3) -0.010(2) 0.0040(18) 0.007(2) C31 0.024(2) 0.026(3) 0.032(3) -0.0013(19) 0.0020(17) -0.0054(18) C32 0.018(2) 0.036(3) 0.032(3) -0.004(2) 0.0029(17) 0.0027(19) C33 0.021(2) 0.029(3) 0.028(2) -0.0017(19) -0.0028(17) -0.0051(18) O1 0.0164(13) 0.0143(15) 0.0165(14) 0.0010(11) 0.0053(10) 0.0039(11) C96 0.0148(19) 0.022(2) 0.023(2) -0.0029(18) 0.0092(15) 0.0047(17) C97 0.019(2) 0.026(3) 0.026(2) 0.0015(18) 0.0066(16) 0.0003(17) C98 0.026(2) 0.023(3) 0.025(2) 0.0052(18) 0.0077(17) -0.0083(18) C99 0.019(2) 0.016(2) 0.019(2) -0.0009(17) 0.0002(15) -0.0027(16) loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' Be Be 0.0005 0.0002 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0106 0.0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' Si Si 0.0817 0.0704 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' Cl Cl 0.1484 0.1585 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle _geom_angle_site_symmetry_1 _geom_angle_site_symmetry_3 Be1 Cl1 Be1 83.5(2) 3 . O1 Be1 Cl1 103.3(2) . 3 O1 Be1 Cl1 103.2(2) . . Cl1 Be1 Cl1 96.5(2) 3 . O1 Be1 Si1 116.4(3) . . Cl1 Be1 Si1 118.5(2) 3 . Cl1 Be1 Si1 116.0(2) . . Be1 Si1 Si11 111.27(14) . . Be1 Si1 Si12 110.17(13) . . Si11 Si1 Si12 106.72(5) . . Be1 Si1 Si13 117.40(13) . . Si11 Si1 Si13 104.98(5) . . Si12 Si1 Si13 105.62(6) . . C12 Si11 C11 107.0(2) . . C12 Si11 C13 105.91(18) . . C11 Si11 C13 108.53(19) . . C12 Si11 Si1 110.43(13) . . C11 Si11 Si1 109.91(14) . . C13 Si11 Si1 114.72(14) . . C23 Si12 C21 107.3(2) . . C23 Si12 C22 107.80(19) . . C21 Si12 C22 106.92(18) . . C23 Si12 Si1 114.29(13) . . C21 Si12 Si1 109.52(13) . . C22 Si12 Si1 110.71(13) . . C33 Si13 C32 104.57(18) . . C33 Si13 C31 106.99(19) . . C32 Si13 C31 107.72(19) . . C33 Si13 Si1 113.02(13) . . C32 Si13 Si1 112.28(13) . . C31 Si13 Si1 111.82(13) . . C99 O1 C96 109.6(3) . . C99 O1 Be1 122.5(3) . . C96 O1 Be1 122.4(3) . . O1 C96 C97 105.0(3) . . C96 C97 C98 102.6(3) . . C99 C98 C97 102.7(3) . . O1 C99 C98 104.3(3) . . loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_distance _geom_bond_site_symmetry_2 Cl1 Be1 2.099(5) 3 Cl1 Be1 2.112(5) . Be1 O1 1.654(5) . Be1 Cl1 2.099(5) 3 Be1 Si1 2.239(5) . Si1 Si11 2.3387(15) . Si1 Si12 2.3419(14) . Si1 Si13 2.3499(14) . Si11 C12 1.869(4) . Si11 C11 1.876(4) . Si11 C13 1.879(4) . Si12 C23 1.881(4) . Si12 C21 1.882(4) . Si12 C22 1.883(4) . Si13 C33 1.877(4) . Si13 C32 1.878(4) . Si13 C31 1.881(4) . O1 C99 1.458(4) . O1 C96 1.471(4) . C96 C97 1.507(5) . C97 C98 1.515(5) . C98 C99 1.514(5) . loop_ _geom_torsion_atom_site_label_1 _geom_torsion_atom_site_label_2 _geom_torsion_atom_site_label_3 _geom_torsion_atom_site_label_4 _geom_torsion _geom_torsion_site_symmetry_1 _geom_torsion_site_symmetry_2 _geom_torsion_site_symmetry_3 _geom_torsion_site_symmetry_4 Be1 Cl1 Be1 O1 105.4(3) 3 . . . Be1 Cl1 Be1 Cl1 0.0 3 . . 3 Be1 Cl1 Be1 Si1 -126.2(3) 3 . . . O1 Be1 Si1 Si11 -145.2(2) . . . . Cl1 Be1 Si1 Si11 -21.1(3) 3 . . . Cl1 Be1 Si1 Si11 93.1(2) . . . . O1 Be1 Si1 Si12 96.6(3) . . . . Cl1 Be1 Si1 Si12 -139.21(18) 3 . . . Cl1 Be1 Si1 Si12 -25.1(3) . . . . O1 Be1 Si1 Si13 -24.3(3) . . . . Cl1 Be1 Si1 Si13 99.9(2) 3 . . . Cl1 Be1 Si1 Si13 -145.96(17) . . . . Be1 Si1 Si11 C12 -44.3(2) . . . . Si12 Si1 Si11 C12 75.95(15) . . . . Si13 Si1 Si11 C12 -172.25(15) . . . . Be1 Si1 Si11 C11 73.6(2) . . . . Si12 Si1 Si11 C11 -166.23(15) . . . . Si13 Si1 Si11 C11 -54.43(16) . . . . Be1 Si1 Si11 C13 -163.84(19) . . . . Si12 Si1 Si11 C13 -43.63(15) . . . . Si13 Si1 Si11 C13 68.17(15) . . . . Be1 Si1 Si12 C23 -165.5(2) . . . . Si11 Si1 Si12 C23 73.54(17) . . . . Si13 Si1 Si12 C23 -37.82(17) . . . . Be1 Si1 Si12 C21 -45.1(2) . . . . Si11 Si1 Si12 C21 -166.06(14) . . . . Si13 Si1 Si12 C21 82.57(15) . . . . Be1 Si1 Si12 C22 72.5(2) . . . . Si11 Si1 Si12 C22 -48.41(15) . . . . Si13 Si1 Si12 C22 -159.77(14) . . . . Be1 Si1 Si13 C33 -164.9(2) . . . . Si11 Si1 Si13 C33 -40.67(16) . . . . Si12 Si1 Si13 C33 71.91(16) . . . . Be1 Si1 Si13 C32 -46.9(2) . . . . Si11 Si1 Si13 C32 77.32(15) . . . . Si12 Si1 Si13 C32 -170.10(15) . . . . Be1 Si1 Si13 C31 74.3(2) . . . . Si11 Si1 Si13 C31 -161.47(15) . . . . Si12 Si1 Si13 C31 -48.89(16) . . . . Cl1 Be1 O1 C99 164.7(2) 3 . . . Cl1 Be1 O1 C99 64.6(3) . . . . Si1 Be1 O1 C99 -63.6(4) . . . . Cl1 Be1 O1 C96 -44.1(4) 3 . . . Cl1 Be1 O1 C96 -144.2(3) . . . . Si1 Be1 O1 C96 87.5(4) . . . . C99 O1 C96 C97 10.1(4) . . . . Be1 O1 C96 C97 -144.3(3) . . . . O1 C96 C97 C98 -30.8(4) . . . . C96 C97 C98 C99 39.6(4) . . . . C96 O1 C99 C98 14.9(4) . . . . Be1 O1 C99 C98 169.3(3) . . . . C97 C98 C99 O1 -33.7(4) . . . .