#------------------------------------------------------------------------------ #$Date: 2021-08-01 02:51:52 +0300 (Sun, 01 Aug 2021) $ #$Revision: 267873 $ #$URL: file:///home/coder/svn-repositories/cod/cif/1/56/43/1564302.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/ # # All data on this site have been placed in the public domain by the # contributors. # data_1564302 loop_ _publ_author_name 'Qian, Yin' 'Yao, Wan-Wan' 'Shao, Dong-Sheng' 'Zhang, Jin' 'Ren, Xiao-Ming' _publ_section_title ; Two Ongoing Magnetic Transitions Originating from Spin-Peierls Dimerization and Cation Orientation Transformation in an S = 1/2 Spin Chain System ; _journal_name_full 'The Journal of Physical Chemistry C' _journal_paper_doi 10.1021/acs.jpcc.1c04863 _journal_year 2021 _chemical_formula_sum 'C14 H14 N5 Ni S4' _chemical_formula_weight 439.25 _space_group_IT_number 14 _space_group_name_Hall '-P 2ybc' _space_group_name_H-M_alt 'P 1 21/c 1' _symmetry_cell_setting monoclinic _symmetry_space_group_name_H-M 'P 1 21/c 1' _atom_sites_solution_hydrogens geom _atom_sites_solution_primary direct _atom_sites_solution_secondary difmap _audit_creation_method SHELXL-97 _cell_angle_alpha 90.00 _cell_angle_beta 90.346(2) _cell_angle_gamma 90.00 _cell_formula_units_Z 4 _cell_length_a 6.8750(4) _cell_length_b 19.7127(12) _cell_length_c 14.1318(8) _cell_measurement_reflns_used 6675 _cell_measurement_temperature 223(2) _cell_measurement_theta_max 27.00 _cell_measurement_theta_min 2.52 _cell_volume 1915.17(19) _computing_structure_refinement 'SHELXL-97 (Sheldrick, 1997)' _computing_structure_solution 'SHELXS-97 (Sheldrick, 1990)' _diffrn_ambient_temperature 223(2) _diffrn_measured_fraction_theta_full 0.992 _diffrn_measured_fraction_theta_max 0.992 _diffrn_measurement_device_type 'Bruker APEX-II CCD' _diffrn_measurement_method '\f and \w scans' _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'fine-focus sealed tube' _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength 0.71073 _diffrn_reflns_av_R_equivalents 0.0533 _diffrn_reflns_av_sigmaI/netI 0.0638 _diffrn_reflns_limit_h_max 8 _diffrn_reflns_limit_h_min -8 _diffrn_reflns_limit_k_max 25 _diffrn_reflns_limit_k_min -20 _diffrn_reflns_limit_l_max 18 _diffrn_reflns_limit_l_min -18 _diffrn_reflns_number 18576 _diffrn_reflns_theta_full 27.58 _diffrn_reflns_theta_max 27.58 _diffrn_reflns_theta_min 2.52 _exptl_absorpt_coefficient_mu 1.455 _exptl_crystal_colour black _exptl_crystal_density_diffrn 1.523 _exptl_crystal_density_method 'not measured' _exptl_crystal_description plate _exptl_crystal_F_000 900 _exptl_crystal_size_max 0.15 _exptl_crystal_size_mid 0.12 _exptl_crystal_size_min 0.08 _refine_diff_density_max 0.902 _refine_diff_density_min -0.525 _refine_diff_density_rms 0.094 _refine_ls_extinction_coef 0.0035(5) _refine_ls_extinction_expression Fc^*^=kFc[1+0.001xFc^2^\l^3^/sin(2\q)]^-1/4^ _refine_ls_extinction_method SHELXL _refine_ls_goodness_of_fit_ref 1.030 _refine_ls_hydrogen_treatment mixed _refine_ls_matrix_type full _refine_ls_number_parameters 220 _refine_ls_number_reflns 4400 _refine_ls_number_restraints 0 _refine_ls_restrained_S_all 1.030 _refine_ls_R_factor_all 0.1099 _refine_ls_R_factor_gt 0.0670 _refine_ls_shift/su_max 0.000 _refine_ls_shift/su_mean 0.000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'calc w=1/[\s^2^(Fo^2^)+(0.0213P)^2^+9.9313P] where P=(Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_gt 0.1332 _refine_ls_wR_factor_ref 0.1467 _reflns_number_gt 2923 _reflns_number_total 4400 _reflns_threshold_expression >2sigma(I) _cod_data_source_file jp1c04863_si_002.cif _cod_data_source_block 1 _cod_original_sg_symbol_H-M P2(1)/c _cod_database_code 1564302 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x, y+1/2, -z+1/2' '-x, -y, -z' 'x, -y-1/2, z-1/2' loop_ _atom_site_label _atom_site_type_symbol _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_occupancy _atom_site_symmetry_multiplicity _atom_site_calc_flag _atom_site_refinement_flags _atom_site_disorder_assembly _atom_site_disorder_group Ni1 Ni 0.75861(10) 0.95204(3) 0.46126(5) 0.0366(2) Uani 1 1 d . . . S1 S 0.7754(2) 0.84598(7) 0.42765(12) 0.0514(4) Uani 1 1 d . . . S2 S 0.7636(2) 0.98123(7) 0.31469(11) 0.0463(4) Uani 1 1 d . . . S3 S 0.7406(2) 0.92129(7) 0.60605(11) 0.0492(4) Uani 1 1 d . . . S4 S 0.7461(2) 1.05775(6) 0.49728(10) 0.0391(3) Uani 1 1 d . . . N1 N 0.8063(15) 0.7287(4) 0.2275(6) 0.130(3) Uani 1 1 d . . . N2 N 0.7945(11) 0.9067(4) 0.0738(5) 0.093(2) Uani 1 1 d . . . N3 N 0.7166(13) 0.9903(4) 0.8470(5) 0.105(3) Uani 1 1 d . . . N4 N 0.7127(8) 1.1695(3) 0.7082(4) 0.0653(15) Uani 1 1 d . . . N5 N 0.7248(9) 0.3469(3) 0.5855(5) 0.0714(18) Uani 1 1 d . . . C1 C 0.7960(12) 0.7810(4) 0.2606(6) 0.077(2) Uani 1 1 d . . . C2 C 0.7845(9) 0.8454(3) 0.3064(5) 0.0521(16) Uani 1 1 d . . . C3 C 0.7784(9) 0.9045(3) 0.2554(5) 0.0523(15) Uani 1 1 d . . . C4 C 0.7889(11) 0.9059(4) 0.1556(5) 0.0655(19) Uani 1 1 d . . . C5 C 0.7198(11) 0.9941(4) 0.7667(5) 0.0656(19) Uani 1 1 d . . . C6 C 0.7301(9) 0.9964(3) 0.6654(4) 0.0475(14) Uani 1 1 d . . . C7 C 0.7323(8) 1.0567(3) 0.6178(4) 0.0416(13) Uani 1 1 d . . . C8 C 0.7209(9) 1.1192(3) 0.6681(4) 0.0497(15) Uani 1 1 d . . . C9 C 0.8834(12) 0.3027(4) 0.5529(6) 0.087(3) Uani 1 1 d . . . H9A H 0.9067 0.2656 0.5978 0.104 Uiso 1 1 calc R . . H9B H 1.0041 0.3285 0.5451 0.104 Uiso 1 1 calc R . . C10 C 0.8104(16) 0.2753(5) 0.4576(7) 0.106(3) Uani 1 1 d . . . H10A H 0.8681 0.3011 0.4055 0.128 Uiso 1 1 calc R . . H10B H 0.8467 0.2275 0.4506 0.128 Uiso 1 1 calc R . . C11 C 0.6003(16) 0.2824(7) 0.4560(7) 0.127(4) Uani 1 1 d . . . H11A H 0.5376 0.2385 0.4450 0.152 Uiso 1 1 calc R . . H11B H 0.5594 0.3140 0.4062 0.152 Uiso 1 1 calc R . . C12 C 0.5486(12) 0.3100(5) 0.5530(7) 0.095(3) Uani 1 1 d . . . H12A H 0.4369 0.3407 0.5488 0.113 Uiso 1 1 calc R . . H12B H 0.5172 0.2730 0.5966 0.113 Uiso 1 1 calc R . . C13 C 0.7439(16) 0.4156(4) 0.5441(9) 0.141(5) Uani 1 1 d . . . H13A H 0.8756 0.4320 0.5538 0.212 Uiso 1 1 calc R . . H13B H 0.6531 0.4461 0.5745 0.212 Uiso 1 1 calc R . . H13C H 0.7156 0.4136 0.4768 0.212 Uiso 1 1 calc R . . C14 C 0.7250(16) 0.3511(5) 0.6931(7) 0.115(4) Uani 1 1 d . . . H14A H 0.7152 0.3058 0.7194 0.172 Uiso 1 1 calc R . . H14B H 0.6152 0.3781 0.7137 0.172 Uiso 1 1 calc R . . H14C H 0.8450 0.3721 0.7147 0.172 Uiso 1 1 calc R . . loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_23 _atom_site_aniso_U_13 _atom_site_aniso_U_12 Ni1 0.0299(4) 0.0318(4) 0.0482(4) 0.0024(3) 0.0009(3) 0.0006(3) S1 0.0555(10) 0.0343(7) 0.0643(10) -0.0012(7) -0.0008(8) 0.0013(7) S2 0.0469(9) 0.0420(8) 0.0500(9) 0.0034(7) 0.0019(7) 0.0020(6) S3 0.0555(10) 0.0364(7) 0.0556(9) 0.0090(7) 0.0021(7) 0.0018(7) S4 0.0370(8) 0.0322(7) 0.0479(8) 0.0034(6) 0.0005(6) -0.0003(5) N1 0.187(10) 0.068(5) 0.134(7) -0.050(5) -0.020(6) -0.002(5) N2 0.113(6) 0.099(5) 0.066(4) -0.011(4) -0.011(4) 0.011(4) N3 0.153(8) 0.113(6) 0.049(4) 0.007(4) -0.003(4) -0.023(5) N4 0.063(4) 0.062(4) 0.071(4) -0.012(3) -0.001(3) 0.003(3) N5 0.057(4) 0.046(3) 0.111(5) 0.014(3) 0.016(3) 0.008(3) C1 0.083(6) 0.059(4) 0.087(6) -0.014(4) -0.009(4) -0.001(4) C2 0.042(4) 0.036(3) 0.078(4) -0.009(3) -0.002(3) 0.002(3) C3 0.046(4) 0.053(4) 0.058(4) -0.004(3) -0.003(3) 0.002(3) C4 0.069(5) 0.072(5) 0.055(4) -0.011(4) -0.003(4) 0.004(4) C5 0.079(5) 0.064(4) 0.054(5) 0.005(4) -0.006(4) -0.011(4) C6 0.040(3) 0.054(3) 0.049(4) 0.006(3) -0.001(3) -0.005(3) C7 0.029(3) 0.042(3) 0.053(3) -0.001(3) -0.002(2) -0.006(2) C8 0.047(4) 0.047(4) 0.055(4) 0.001(3) -0.001(3) -0.001(3) C9 0.070(5) 0.084(6) 0.107(7) 0.026(5) 0.011(5) 0.028(4) C10 0.121(9) 0.115(8) 0.083(7) -0.005(6) -0.003(6) 0.029(7) C11 0.104(9) 0.200(13) 0.077(7) 0.003(7) 0.001(6) -0.038(8) C12 0.068(6) 0.107(7) 0.109(7) 0.025(6) 0.003(5) -0.005(5) C13 0.118(9) 0.053(5) 0.254(15) 0.059(7) 0.041(9) 0.009(5) C14 0.163(10) 0.084(6) 0.097(7) -0.032(6) -0.005(7) 0.024(6) loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N 0.0061 0.0033 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' S S 0.1246 0.1234 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' Ni Ni 0.3393 1.1124 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle _geom_angle_site_symmetry_1 _geom_angle_site_symmetry_3 _geom_angle_publ_flag S3 Ni1 S4 92.62(6) . . ? S3 Ni1 S1 86.51(7) . . ? S4 Ni1 S1 178.79(8) . . ? S3 Ni1 S2 177.39(7) . . ? S4 Ni1 S2 88.26(6) . . ? S1 Ni1 S2 92.65(7) . . ? C2 S1 Ni1 103.3(2) . . ? C3 S2 Ni1 103.5(2) . . ? C6 S3 Ni1 103.2(2) . . ? C7 S4 Ni1 103.13(19) . . ? C9 N5 C13 110.5(7) . . ? C9 N5 C12 102.6(7) . . ? C13 N5 C12 113.6(7) . . ? C9 N5 C14 110.4(6) . . ? C13 N5 C14 110.2(8) . . ? C12 N5 C14 109.3(7) . . ? N1 C1 C2 177.4(10) . . ? C3 C2 C1 121.3(7) . . ? C3 C2 S1 121.3(5) . . ? C1 C2 S1 117.5(5) . . ? C2 C3 C4 122.7(6) . . ? C2 C3 S2 119.3(5) . . ? C4 C3 S2 118.0(5) . . ? N2 C4 C3 178.9(9) . . ? N3 C5 C6 177.4(9) . . ? C7 C6 C5 121.4(6) . . ? C7 C6 S3 120.9(5) . . ? C5 C6 S3 117.8(5) . . ? C6 C7 C8 120.4(5) . . ? C6 C7 S4 120.2(5) . . ? C8 C7 S4 119.4(4) . . ? N4 C8 C7 179.6(8) . . ? N5 C9 C10 104.1(7) . . ? C11 C10 C9 107.5(8) . . ? C10 C11 C12 105.0(8) . . ? N5 C12 C11 105.0(7) . . ? loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_distance _geom_bond_site_symmetry_2 _geom_bond_publ_flag Ni1 S3 2.1383(17) . ? Ni1 S4 2.1469(15) . ? Ni1 S1 2.1474(16) . ? Ni1 S2 2.1503(17) . ? S1 C2 1.714(7) . ? S2 C3 1.732(6) . ? S3 C6 1.704(6) . ? S4 C7 1.706(6) . ? N1 C1 1.134(9) . ? N2 C4 1.157(9) . ? N3 C5 1.137(9) . ? N4 C8 1.143(7) . ? N5 C9 1.473(9) . ? N5 C13 1.481(9) . ? N5 C12 1.483(10) . ? N5 C14 1.522(10) . ? C1 C2 1.428(9) . ? C2 C3 1.371(8) . ? C3 C4 1.413(9) . ? C5 C6 1.435(9) . ? C6 C7 1.366(8) . ? C7 C8 1.425(8) . ? C9 C10 1.532(12) . ? C10 C11 1.451(13) . ? C11 C12 1.519(12) . ?