#------------------------------------------------------------------------------ #$Date: 2020-05-12 02:22:05 +0300 (Tue, 12 May 2020) $ #$Revision: 251957 $ #$URL: file:///home/coder/svn-repositories/cod/cif/4/03/83/4038340.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/ # # All data on this site have been placed in the public domain by the # contributors. # data_4038340 loop_ _publ_author_name 'Duddupudi, Anantha Lakshmi' 'Pandey, Pankaj' 'Vo, Hien' 'Welsh, Colin L.' 'Doerksen, Robert J.' 'Cuny, Gregory D.' _publ_section_title ; Hypervalent Iodine Mediated Oxidative Cyclization of Acrylamide N-Carbamates to 5,5-Disubstituted Oxazolidine-2,4-diones ; _journal_name_full 'The Journal of Organic Chemistry' _journal_paper_doi 10.1021/acs.joc.0c00581 _journal_year 2020 _chemical_formula_sum 'C13 H19 N O4' _chemical_formula_weight 253.29 _space_group_IT_number 14 _space_group_name_Hall '-P 2yn' _space_group_name_H-M_alt 'P 1 21/n 1' _symmetry_cell_setting monoclinic _symmetry_space_group_name_H-M 'P 1 21/n 1' _atom_sites_solution_hydrogens geom _atom_sites_solution_primary direct _atom_sites_solution_secondary difmap _audit_creation_method SHELXL-97 _cell_angle_alpha 90.00 _cell_angle_beta 99.070(3) _cell_angle_gamma 90.00 _cell_formula_units_Z 4 _cell_length_a 6.8579(4) _cell_length_b 24.7186(16) _cell_length_c 7.8064(5) _cell_measurement_reflns_used 7056 _cell_measurement_temperature 123(2) _cell_measurement_theta_max 66.75 _cell_measurement_theta_min 6.01 _cell_volume 1306.78(14) _computing_cell_refinement 'SAINT v7.60A (Bruker-Nonius, 2013)' _computing_data_collection 'APEX2 v2013.4-1 (Bruker-Nonius, 2013)' _computing_data_reduction 'SAINT v7.60A (Bruker-Nonius, 2013)' _computing_structure_refinement 'SHELXL v6.12 (G.M. Sheldrick, 2001)' _computing_structure_solution 'SHELXS v6.12 (G.M. Sheldrick, 2001)' _diffrn_ambient_temperature 123(2) _diffrn_detector_area_resol_mean 4K _diffrn_measured_fraction_theta_full 0.977 _diffrn_measured_fraction_theta_max 0.978 _diffrn_measurement_device_type 'Bruker DUO APEX II CCD' _diffrn_measurement_method CCD _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'Incoatec 30 Watt Cu microsource' _diffrn_radiation_type CuK\a _diffrn_radiation_wavelength 1.54178 _diffrn_reflns_av_R_equivalents 0.0292 _diffrn_reflns_av_sigmaI/netI 0.0254 _diffrn_reflns_limit_h_max 8 _diffrn_reflns_limit_h_min -6 _diffrn_reflns_limit_k_max 25 _diffrn_reflns_limit_k_min -29 _diffrn_reflns_limit_l_max 9 _diffrn_reflns_limit_l_min -9 _diffrn_reflns_number 7516 _diffrn_reflns_theta_full 66.75 _diffrn_reflns_theta_max 66.75 _diffrn_reflns_theta_min 6.01 _diffrn_standards_decay_% 0.0 _exptl_absorpt_coefficient_mu 0.787 _exptl_absorpt_correction_T_max 0.7528 _exptl_absorpt_correction_T_min 0.6460 _exptl_absorpt_correction_type empirical _exptl_absorpt_process_details 'SAINT v7.62A' _exptl_crystal_colour Colorless _exptl_crystal_density_diffrn 1.287 _exptl_crystal_density_method 'not measured' _exptl_crystal_description 'flat column' _exptl_crystal_F_000 544 _exptl_crystal_size_max 0.45 _exptl_crystal_size_mid 0.35 _exptl_crystal_size_min 0.08 _refine_diff_density_max 0.315 _refine_diff_density_min -0.185 _refine_diff_density_rms 0.038 _refine_ls_extinction_coef 0.0054(6) _refine_ls_extinction_expression Fc^*^=kFc[1+0.001xFc^2^\l^3^/sin(2\q)]^-1/4^ _refine_ls_extinction_method SHELXL _refine_ls_goodness_of_fit_ref 1.052 _refine_ls_hydrogen_treatment mixed _refine_ls_matrix_type full _refine_ls_number_parameters 175 _refine_ls_number_reflns 2270 _refine_ls_number_restraints 2 _refine_ls_restrained_S_all 1.052 _refine_ls_R_factor_all 0.0335 _refine_ls_R_factor_gt 0.0328 _refine_ls_shift/su_max 0.001 _refine_ls_shift/su_mean 0.000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'calc w=1/[\s^2^(Fo^2^)+(0.0411P)^2^+0.4827P] where P=(Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_gt 0.0865 _refine_ls_wR_factor_ref 0.0875 _reflns_number_gt 2208 _reflns_number_total 2270 _reflns_threshold_expression >3.99sigma(I) _cod_data_source_file jo0c00581_si_003.cif _cod_data_source_block k1649 _cod_depositor_comments ; The following automatic conversions were performed: data item '_exptl_absorpt_correction_type' value 'Empirical' was changed to 'empirical' in accordance with the /home/data/users/saulius/crontab/automatic-downloads/rss-feeds/ACS/lib/dictionaries/cif_core.dic dictionary named 'cif_core.dic' version 2.4.2 last updated on 2011-04-26. data item '_symmetry_cell_setting' value 'Monoclinic' was changed to 'monoclinic' in accordance with the /home/data/users/saulius/crontab/automatic-downloads/rss-feeds/ACS/lib/dictionaries/cif_core.dic dictionary named 'cif_core.dic' version 2.4.2 last updated on 2011-04-26. Automatic conversion script Id: cif_fix_values 7556 2019-12-06 15:28:31Z antanas ; _cod_original_sg_symbol_H-M P2(1)/n _cod_database_code 4038340 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x+1/2, y+1/2, -z+1/2' '-x, -y, -z' 'x-1/2, -y-1/2, z-1/2' loop_ _atom_site_label _atom_site_type_symbol _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_occupancy _atom_site_symmetry_multiplicity _atom_site_calc_flag _atom_site_refinement_flags _atom_site_disorder_assembly _atom_site_disorder_group O1 O 0.57992(14) 0.76884(4) 0.32459(13) 0.0350(3) Uani 1 1 d . . . O2 O 0.69510(12) 0.47476(3) 0.02105(10) 0.0205(2) Uani 1 1 d . . . O3 O 0.80859(12) 0.46171(3) 0.48370(10) 0.0198(2) Uani 1 1 d D . . H3X H 0.7190(19) 0.4825(5) 0.5222(19) 0.030 Uiso 1 1 d D . . O4 O 0.40097(12) 0.48072(3) 0.30330(10) 0.0227(2) Uani 1 1 d D . . H4X H 0.371(2) 0.4940(6) 0.1972(13) 0.034 Uiso 1 1 d D . . N1 N 0.86407(14) 0.52808(4) 0.23259(13) 0.0193(2) Uani 1 1 d . . . H1N H 0.913(2) 0.5290(6) 0.340(2) 0.023 Uiso 1 1 d . . . C1 C 0.93620(18) 0.66681(5) 0.25186(16) 0.0255(3) Uani 1 1 d . . . H1 H 1.0756 0.6626 0.2740 0.031 Uiso 1 1 calc R . . C2 C 0.85299(19) 0.71429(5) 0.30023(18) 0.0294(3) Uani 1 1 d . . . H2 H 0.9350 0.7422 0.3556 0.035 Uiso 1 1 calc R . . C3 C 0.64910(19) 0.72120(5) 0.26777(16) 0.0249(3) Uani 1 1 d . . . C4 C 0.53023(17) 0.68046(5) 0.18498(15) 0.0220(3) Uani 1 1 d . . . H4 H 0.3912 0.6852 0.1594 0.026 Uiso 1 1 calc R . . C5 C 0.61629(17) 0.63269(5) 0.13989(14) 0.0206(3) Uani 1 1 d . . . H5 H 0.5341 0.6045 0.0863 0.025 Uiso 1 1 calc R . . C6 C 0.81974(17) 0.62511(5) 0.17135(14) 0.0198(3) Uani 1 1 d . . . C7 C 0.91091(17) 0.57261(5) 0.12323(15) 0.0214(3) Uani 1 1 d . . . H7A H 0.8611 0.5640 0.0002 0.026 Uiso 1 1 calc R . . H7B H 1.0560 0.5769 0.1361 0.026 Uiso 1 1 calc R . . C8 C 0.3715(2) 0.77518(6) 0.30755(19) 0.0352(3) Uani 1 1 d . . . H8A H 0.3410 0.8107 0.3524 0.053 Uiso 1 1 calc R . . H8B H 0.3169 0.7468 0.3736 0.053 Uiso 1 1 calc R . . H8C H 0.3131 0.7725 0.1849 0.053 Uiso 1 1 calc R . . C9 C 0.76151(16) 0.48431(4) 0.17500(14) 0.0168(3) Uani 1 1 d . . . C10 C 0.73038(16) 0.44259(4) 0.31468(14) 0.0181(3) Uani 1 1 d . . . C11 C 0.50734(17) 0.43103(5) 0.29862(14) 0.0208(3) Uani 1 1 d . . . H11 H 0.4619 0.4127 0.1852 0.025 Uiso 1 1 calc R . . C12 C 0.84691(19) 0.39214(5) 0.28268(16) 0.0263(3) Uani 1 1 d . . . H12A H 0.8349 0.3652 0.3725 0.039 Uiso 1 1 calc R . . H12B H 0.9863 0.4016 0.2864 0.039 Uiso 1 1 calc R . . H12C H 0.7946 0.3771 0.1685 0.039 Uiso 1 1 calc R . . C13 C 0.4575(2) 0.39538(6) 0.44369(17) 0.0308(3) Uani 1 1 d . . . H13A H 0.3150 0.3885 0.4260 0.046 Uiso 1 1 calc R . . H13B H 0.4966 0.4136 0.5552 0.046 Uiso 1 1 calc R . . H13C H 0.5285 0.3610 0.4437 0.046 Uiso 1 1 calc R . . loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_23 _atom_site_aniso_U_13 _atom_site_aniso_U_12 O1 0.0347(5) 0.0207(5) 0.0522(6) -0.0073(4) 0.0147(4) -0.0014(4) O2 0.0231(4) 0.0243(4) 0.0141(4) -0.0003(3) 0.0025(3) 0.0015(3) O3 0.0201(4) 0.0254(4) 0.0136(4) -0.0013(3) 0.0013(3) 0.0020(3) O4 0.0218(4) 0.0320(5) 0.0145(4) 0.0017(3) 0.0036(3) 0.0059(3) N1 0.0217(5) 0.0215(5) 0.0142(5) 0.0007(4) 0.0015(4) 0.0003(4) C1 0.0221(6) 0.0277(6) 0.0272(6) -0.0001(5) 0.0051(5) -0.0040(5) C2 0.0287(7) 0.0246(6) 0.0354(7) -0.0057(5) 0.0069(6) -0.0087(5) C3 0.0311(7) 0.0187(6) 0.0266(6) 0.0013(4) 0.0102(5) -0.0012(5) C4 0.0224(6) 0.0249(6) 0.0194(6) 0.0027(4) 0.0050(5) -0.0002(5) C5 0.0237(6) 0.0234(6) 0.0150(5) 0.0000(4) 0.0036(4) -0.0038(4) C6 0.0242(6) 0.0211(6) 0.0147(5) 0.0032(4) 0.0056(4) -0.0016(4) C7 0.0229(6) 0.0230(6) 0.0194(6) 0.0013(4) 0.0066(5) -0.0012(4) C8 0.0370(8) 0.0298(7) 0.0402(8) -0.0049(6) 0.0108(6) 0.0067(6) C9 0.0150(5) 0.0202(6) 0.0159(5) -0.0007(4) 0.0042(4) 0.0052(4) C10 0.0214(6) 0.0198(6) 0.0127(5) -0.0005(4) 0.0014(4) 0.0016(4) C11 0.0229(6) 0.0230(6) 0.0160(5) -0.0006(4) 0.0015(5) -0.0015(4) C12 0.0333(7) 0.0238(6) 0.0216(6) 0.0014(5) 0.0044(5) 0.0084(5) C13 0.0304(7) 0.0348(7) 0.0268(7) 0.0079(5) 0.0036(5) -0.0082(5) loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0181 0.0091 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N 0.0311 0.0180 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0492 0.0322 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle _geom_angle_site_symmetry_1 _geom_angle_site_symmetry_3 _geom_angle_publ_flag C3 O1 C8 117.31(10) . . ? C9 N1 C7 124.71(10) . . ? C2 C1 C6 121.30(11) . . ? C1 C2 C3 120.02(11) . . ? O1 C3 C4 124.48(11) . . ? O1 C3 C2 115.85(11) . . ? C4 C3 C2 119.65(11) . . ? C3 C4 C5 119.48(11) . . ? C4 C5 C6 121.59(11) . . ? C5 C6 C1 117.93(11) . . ? C5 C6 C7 120.92(10) . . ? C1 C6 C7 121.13(11) . . ? N1 C7 C6 111.34(9) . . ? O2 C9 N1 125.25(10) . . ? O2 C9 C10 119.24(10) . . ? N1 C9 C10 115.50(10) . . ? O3 C10 C12 107.04(9) . . ? O3 C10 C9 111.08(9) . . ? C12 C10 C9 107.29(9) . . ? O3 C10 C11 111.15(9) . . ? C12 C10 C11 111.99(10) . . ? C9 C10 C11 108.25(9) . . ? O4 C11 C13 107.68(10) . . ? O4 C11 C10 109.99(9) . . ? C13 C11 C10 112.63(10) . . ? loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_distance _geom_bond_site_symmetry_2 _geom_bond_publ_flag O1 C3 1.3692(15) . ? O1 C8 1.4230(17) . ? O2 C9 1.2389(14) . ? O3 C10 1.4244(13) . ? O4 C11 1.4321(14) . ? N1 C9 1.3295(15) . ? N1 C7 1.4595(14) . ? C1 C2 1.3833(18) . ? C1 C6 1.3918(17) . ? C2 C3 1.3917(19) . ? C3 C4 1.3893(18) . ? C4 C5 1.3901(17) . ? C5 C6 1.3907(16) . ? C6 C7 1.5133(16) . ? C9 C10 1.5400(15) . ? C10 C12 1.5229(16) . ? C10 C11 1.5415(16) . ? C11 C13 1.5160(16) . ? loop_ _geom_hbond_atom_site_label_D _geom_hbond_atom_site_label_H _geom_hbond_atom_site_label_A _geom_hbond_distance_DH _geom_hbond_distance_HA _geom_hbond_distance_DA _geom_hbond_angle_DHA _geom_hbond_site_symmetry_A O3 H3X O4 0.889(9) 1.927(10) 2.7582(11) 155.1(14) 3_666 O4 H4X O2 0.884(9) 1.861(9) 2.7441(11) 177.1(15) 3_665 N1 H1N O3 0.852(16) 2.182(16) 2.9053(13) 142.7(13) 3_766 loop_ _geom_torsion_atom_site_label_1 _geom_torsion_atom_site_label_2 _geom_torsion_atom_site_label_3 _geom_torsion_atom_site_label_4 _geom_torsion _geom_torsion_site_symmetry_1 _geom_torsion_site_symmetry_2 _geom_torsion_site_symmetry_3 _geom_torsion_site_symmetry_4 _geom_torsion_publ_flag C6 C1 C2 C3 -0.35(19) . . . . ? C8 O1 C3 C4 4.37(18) . . . . ? C8 O1 C3 C2 -174.50(11) . . . . ? C1 C2 C3 O1 178.22(11) . . . . ? C1 C2 C3 C4 -0.71(18) . . . . ? O1 C3 C4 C5 -177.08(11) . . . . ? C2 C3 C4 C5 1.75(17) . . . . ? C3 C4 C5 C6 -1.78(17) . . . . ? C4 C5 C6 C1 0.73(16) . . . . ? C4 C5 C6 C7 179.33(10) . . . . ? C2 C1 C6 C5 0.35(17) . . . . ? C2 C1 C6 C7 -178.25(11) . . . . ? C9 N1 C7 C6 117.81(12) . . . . ? C5 C6 C7 N1 -68.77(13) . . . . ? C1 C6 C7 N1 109.79(12) . . . . ? C7 N1 C9 O2 1.49(17) . . . . ? C7 N1 C9 C10 180.00(10) . . . . ? O2 C9 C10 O3 -177.28(9) . . . . ? N1 C9 C10 O3 4.12(13) . . . . ? O2 C9 C10 C12 66.05(13) . . . . ? N1 C9 C10 C12 -112.55(11) . . . . ? O2 C9 C10 C11 -54.99(13) . . . . ? N1 C9 C10 C11 126.41(10) . . . . ? O3 C10 C11 O4 69.10(11) . . . . ? C12 C10 C11 O4 -171.23(9) . . . . ? C9 C10 C11 O4 -53.15(11) . . . . ? O3 C10 C11 C13 -51.02(13) . . . . ? C12 C10 C11 C13 68.65(12) . . . . ? C9 C10 C11 C13 -173.27(10) . . . . ?