#------------------------------------------------------------------------------ #$Date: 2017-08-05 21:34:20 +0300 (Sat, 05 Aug 2017) $ #$Revision: 199568 $ #$URL: file:///home/coder/svn-repositories/cod/cif/4/51/41/4514126.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/ # # All data on this site have been placed in the public domain by the # contributors. # data_4514126 loop_ _publ_author_name 'Malaspina, Lorraine A.' 'Edwards, Alison J.' 'Woi\'nska, Magdalena' 'Jayatilaka, Dylan' 'Turner, Michael J.' 'Price, Jason R.' 'Herbst-Irmer, Regine' 'Sugimoto, Kunihisa' 'Nishibori, Eiji' 'Grabowsky, Simon' _publ_contact_author ; Dr. Simon Grabowsky University of Bremen Institute for Inorganic Chemistry and Crystallography Leobener Str. NW2 28359 Bremen Germany ; _publ_section_title ; Predicting the Position of the Hydrogen Atom in the Short Intramolecular Hydrogen Bond of the Hydrogen Maleate Anion from Geometric Correlations ; _journal_issue 7 _journal_name_full 'Crystal Growth & Design' _journal_page_first 3812 _journal_paper_doi 10.1021/acs.cgd.7b00390 _journal_volume 17 _journal_year 2017 _chemical_formula_moiety 'C4 H3 O4, Na O3 H6' _chemical_formula_sum 'C4 H9 Na O7' _chemical_formula_weight 192.10 _chemical_name_common 'Sodium hydrogen maleate' _space_group_IT_number 2 _symmetry_cell_setting triclinic _symmetry_Int_Tables_number 2 _symmetry_space_group_name_Hall '-P 1' _symmetry_space_group_name_H-M 'P -1' _atom_sites_solution_hydrogens difmap _atom_sites_solution_primary isomor _audit_creation_date 2016-07-07 _audit_creation_method CRYSTALS_ver_14.61 _cell_angle_alpha 103.95(3) _cell_angle_beta 91.49(3) _cell_angle_gamma 99.82(3) _cell_formula_units_Z 2 _cell_length_a 5.9390(12) _cell_length_b 6.2687(13) _cell_length_c 11.247(2) _cell_measurement_radiation Synchrotron _cell_measurement_reflns_used 23021 _cell_measurement_temperature 25 _cell_measurement_theta_max 36.165 _cell_measurement_theta_min 0.93 _cell_measurement_wavelength 0.3542 _cell_volume 399.43(15) _computing_cell_refinement 'LaueG (Piltz, 2011)' _computing_data_collection 'MAATEL/ANSTO control program' _computing_data_reduction 'argonne_boxes (Wilkinson et al., 1988) & LaueG (Piltz, 2011)' _computing_publication_material 'CRYSTALS (Betteridge et al., 2003)' _computing_structure_refinement 'CRYSTALS (Betteridge et al., 2003)' _computing_structure_solution 'SHELXS 86 (Sheldrick, 1986)' _diffrn_ambient_temperature 12 _diffrn_measured_fraction_theta_full 0.743 _diffrn_measured_fraction_theta_max 0.743 _diffrn_measurement_details '35 images, exposure time 67 to 100 minutes' _diffrn_measurement_device 'Laue image-plate diffractometer' _diffrn_measurement_device_type KOALA _diffrn_measurement_method Laue _diffrn_radiation_probe neutron _diffrn_radiation_type neutron _diffrn_radiation_wavelength 0.85 _diffrn_reflns_av_R_equivalents 0.0487 _diffrn_reflns_av_unetI/netI 0.0423 _diffrn_reflns_limit_h_max 10 _diffrn_reflns_limit_h_min -10 _diffrn_reflns_limit_k_max 11 _diffrn_reflns_limit_k_min -11 _diffrn_reflns_limit_l_max 20 _diffrn_reflns_limit_l_min -20 _diffrn_reflns_number 26890 _diffrn_reflns_reduction_process 'LaueG (Piltz, 2011)' _diffrn_reflns_resolution_max 1.82 _diffrn_reflns_theta_full 70.96 _diffrn_reflns_theta_max 71.06 _diffrn_source 'nuclear reactor' _diffrn_source_details 'thermal neutrons, supermirror guides' _diffrn_source_type 'OPAL reactor, ANSTO, Lucas Heights, Australia' _diffrn_standards_number 0 _exptl_absorpt_coefficient_mu 0.0 _exptl_absorpt_correction_type none _exptl_crystal_colour colourless _exptl_crystal_density_diffrn 1.597 _exptl_crystal_density_method 'not measured' _exptl_crystal_description block _exptl_crystal_F_000 76 _exptl_crystal_size_max 1.2 _exptl_crystal_size_mid 0.9 _exptl_crystal_size_min 0.8 _refine_diff_density_max 0.82 _refine_diff_density_min -0.87 _refine_ls_extinction_coef 19.9(7) _refine_ls_extinction_method 'Larson (1970), Equation 22' _refine_ls_goodness_of_fit_ref 0.9998 _refine_ls_hydrogen_treatment refall _refine_ls_matrix_type full _refine_ls_number_parameters 191 _refine_ls_number_reflns 2981 _refine_ls_number_restraints 0 _refine_ls_R_factor_all 0.0552 _refine_ls_R_factor_gt 0.0355 _refine_ls_shift/su_max 0.0006363 _refine_ls_shift/su_mean 0.0000494 _refine_ls_structure_factor_coef F _refine_ls_weighting_details ; Method, part 1, Chebychev polynomial, (Watkin, 1994, Prince, 1982) [weight] = 1.0/[A~0~*T~0~(x)+A~1~*T~1~(x) ... +A~n-1~]*T~n-1~(x)] where A~i~ are the Chebychev coefficients listed below and x= Fcalc/Fmax Method = Robust Weighting (Prince, 1982) W = [weight] * [1-(deltaF/6*sigmaF)^2^]^2^ A~i~ are: 1.65 -1.05 0.856 ; _refine_ls_weighting_scheme calc _refine_ls_wR_factor_all 0.0536 _refine_ls_wR_factor_gt 0.0304 _refine_ls_wR_factor_ref 0.0287 _reflns_number_gt 3144 _reflns_number_total 3713 _reflns_threshold_expression >2sigma(I) _oxford_diffrn_Wilson_B_factor 0.00 _oxford_diffrn_Wilson_scale 0.00 _oxford_refine_ls_r_factor_ref 0.0309 _oxford_refine_ls_scale 1.058(2) _oxford_reflns_number_all 3710 _oxford_reflns_threshold_expression_ref I>3.0\s(I) _iucr_refine_instructions_details ; # # Punched on 07/07/16 at 11:51:13 # #LIST 12 BLOCK CONT SCALE CONT NA ( 1 ,X'S,U'S) UNTIL LAST CONT EXTPARAM END # # Punched on 07/07/16 at 11:51:13 # #LIST 16 NO REM HREST START (DO NOT REMOVE THIS LINE) REM HREST END (DO NOT REMOVE THIS LINE) END ; _cod_data_source_file NaHmal_F.cif _cod_data_source_block NaHmal_neutron _cod_depositor_comments 'Adding full bibliography for 4514126--4514133.cif.' _cod_database_code 4514126 loop_ _symmetry_equiv_pos_as_xyz x,y,z -x,-y,-z loop_ _atom_site_label _atom_site_type_symbol _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_occupancy _atom_site_adp_type Na1 Na 0.75371(12) 0.53758(13) 0.42815(6) 0.0062 1.0000 Uani C2 C 0.71458(6) 0.28250(7) 0.07786(3) 0.0058 1.0000 Uani C3 C 0.66045(6) 0.23398(7) -0.04407(3) 0.0057 1.0000 Uani C4 C 0.80884(6) 0.19102(7) -0.15037(3) 0.0047 1.0000 Uani O4 O 0.71127(8) 0.14390(9) -0.25612(4) 0.0065 1.0000 Uani O2 O 1.02391(8) 0.20450(9) -0.13102(4) 0.0062 1.0000 Uani O1 O 1.12561(7) 0.28600(9) 0.08971(4) 0.0063 1.0000 Uani O3 O 0.94775(8) 0.36137(9) 0.26104(4) 0.0067 1.0000 Uani O6 O 0.37299(8) 0.32904(9) 0.36968(4) 0.0074 1.0000 Uani O7 O 0.85589(8) 0.25060(9) 0.51544(4) 0.0072 1.0000 Uani O5 O 0.72319(8) 0.83942(9) 0.33865(4) 0.0070 1.0000 Uani H3 H 0.48090(18) 0.2229(3) -0.07285(11) 0.0226 1.0000 Uani H2 H 0.57577(18) 0.3080(3) 0.13866(10) 0.0215 1.0000 Uani H6 H 0.2432(2) 0.3597(2) 0.32600(12) 0.0231 1.0000 Uani H7 H 0.3606(3) 0.1686(2) 0.33945(13) 0.0247 1.0000 Uani H9 H 0.8165(2) 0.2178(2) 0.59276(10) 0.0232 1.0000 Uani H8 H 0.8198(2) 0.1073(2) 0.45424(11) 0.0219 1.0000 Uani H4 H 0.57158(18) 0.8395(2) 0.30280(11) 0.0210 1.0000 Uani H5 H 0.8225(2) 0.8334(2) 0.27070(11) 0.0216 1.0000 Uani H1 H 1.08759(18) 0.2487(2) -0.00846(9) 0.0174 1.0000 Uani C1 C 0.94067(6) 0.31172(7) 0.14776(3) 0.0047 1.0000 Uani loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_23 _atom_site_aniso_U_13 _atom_site_aniso_U_12 Na1 0.0065(2) 0.0064(3) 0.0061(2) 0.00214(19) 0.00062(17) 0.0014(2) C2 0.00467(12) 0.00791(15) 0.00470(12) 0.00123(10) 0.00021(9) 0.00124(12) C3 0.00407(12) 0.00829(15) 0.00451(12) 0.00136(10) 0.00011(9) 0.00086(11) C4 0.00450(11) 0.00515(14) 0.00432(11) 0.00120(10) 0.00028(9) 0.00083(11) O4 0.00623(14) 0.00826(17) 0.00449(13) 0.00115(12) -0.00068(11) 0.00066(14) O2 0.00448(14) 0.00918(18) 0.00496(13) 0.00145(12) 0.00046(11) 0.00165(13) O1 0.00453(13) 0.00934(18) 0.00501(13) 0.00159(12) 0.00062(11) 0.00184(13) O3 0.00711(14) 0.00914(18) 0.00395(13) 0.00122(12) 0.00029(11) 0.00220(14) O6 0.00668(14) 0.00733(18) 0.00766(15) 0.00107(13) -0.00066(12) 0.00081(14) O7 0.00793(15) 0.00649(17) 0.00710(15) 0.00200(13) 0.00026(12) 0.00096(14) O5 0.00689(15) 0.00773(18) 0.00677(14) 0.00227(13) 0.00058(12) 0.00180(14) H3 0.0109(3) 0.0376(7) 0.0191(4) 0.0063(4) -0.0010(3) 0.0050(4) H2 0.0144(3) 0.0345(6) 0.0160(3) 0.0044(4) 0.0058(3) 0.0075(4) H6 0.0208(4) 0.0264(6) 0.0240(4) 0.0074(4) -0.0054(4) 0.0085(4) H7 0.0310(5) 0.0116(4) 0.0298(5) 0.0008(4) -0.0001(4) 0.0054(4) H9 0.0298(5) 0.0251(5) 0.0157(4) 0.0088(4) 0.0054(3) 0.0020(4) H8 0.0276(5) 0.0153(4) 0.0193(4) -0.0013(3) 0.0002(3) 0.0023(4) H4 0.0131(3) 0.0285(5) 0.0220(4) 0.0073(4) -0.0023(3) 0.0047(4) H5 0.0188(4) 0.0297(6) 0.0181(4) 0.0075(4) 0.0077(3) 0.0057(4) H1 0.0157(3) 0.0214(4) 0.0157(3) 0.0047(3) 0.0034(3) 0.0047(3) C1 0.00499(12) 0.00501(14) 0.00397(11) 0.00108(10) 0.00023(9) 0.00093(11) loop_ _atom_type_symbol _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_Cromer_Mann_a1 _atom_type_scat_Cromer_Mann_b1 _atom_type_scat_Cromer_Mann_a2 _atom_type_scat_Cromer_Mann_b2 _atom_type_scat_Cromer_Mann_a3 _atom_type_scat_Cromer_Mann_b3 _atom_type_scat_Cromer_Mann_a4 _atom_type_scat_Cromer_Mann_b4 _atom_type_scat_Cromer_Mann_c _atom_type_scat_source C 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 6.6484 'Neutron Data Booklet 2nd Ed July 2003, ILL Table 1.1' H 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 -3.7409 'Neutron Data Booklet 2nd Ed July 2003, ILL Table 1.1' O 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 5.8050 'Neutron Data Booklet 2nd Ed July 2003, ILL Table 1.1' Na 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 3.6300 'Neutron Data Booklet 2nd Ed July 2003, ILL Table 1.1' loop_ _geom_angle_atom_site_label_1 _geom_angle_site_symmetry_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle_site_symmetry_3 _geom_angle _geom_angle_publ_flag O6 2_666 Na1 O7 2_766 93.22(4) yes O6 2_666 Na1 Na1 2_766 87.30(5) yes O7 2_766 Na1 Na1 2_766 43.89(3) yes O6 2_666 Na1 Na1 2_666 43.66(3) yes O7 2_766 Na1 Na1 2_666 136.88(4) yes Na1 2_766 Na1 Na1 2_666 117.87(4) yes O6 2_666 Na1 O3 . 163.61(4) yes O7 2_766 Na1 O3 . 79.56(5) yes Na1 2_766 Na1 O3 . 77.27(5) yes Na1 2_666 Na1 O3 . 141.49(5) yes O6 2_666 Na1 O6 . 87.65(4) yes O7 2_766 Na1 O6 . 179.12(4) yes Na1 2_766 Na1 O6 . 136.38(5) yes Na1 2_666 Na1 O6 . 43.98(3) yes O3 . Na1 O6 . 99.64(5) yes O6 2_666 Na1 O7 . 82.80(5) yes O7 2_766 Na1 O7 . 88.96(5) yes Na1 2_766 Na1 O7 . 45.07(3) yes Na1 2_666 Na1 O7 . 85.91(4) yes O3 . Na1 O7 . 82.38(4) yes O6 2_666 Na1 O5 . 101.51(5) yes O7 2_766 Na1 O5 . 81.68(4) yes Na1 2_766 Na1 O5 . 125.46(5) yes Na1 2_666 Na1 O5 . 103.58(5) yes O3 . Na1 O5 . 92.06(4) yes O6 . Na1 O7 . 91.31(5) yes O6 . Na1 O5 . 97.99(4) yes O7 . Na1 O5 . 169.87(4) yes C3 . C2 H2 . 117.30(8) no C3 . C2 C1 . 130.51(4) yes H2 . C2 C1 . 112.18(7) no C2 . C3 C4 . 130.40(4) yes C2 . C3 H3 . 116.68(8) no C4 . C3 H3 . 112.92(7) no C3 . C4 O4 . 116.98(4) yes C3 . C4 O2 . 120.13(4) yes O4 . C4 O2 . 122.89(5) yes H1 . O1 C1 . 110.57(8) no Na1 . O3 C1 . 141.75(4) yes Na1 . O6 Na1 2_666 92.35(6) yes Na1 . O6 H6 . 131.58(10) no Na1 2_666 O6 H6 . 95.19(10) no Na1 . O6 H7 . 115.79(11) no Na1 2_666 O6 H7 . 116.92(10) no H6 . O6 H7 . 102.87(14) no Na1 . O7 Na1 2_766 91.04(4) yes Na1 . O7 H9 . 128.68(10) no Na1 2_766 O7 H9 . 100.32(10) no Na1 . O7 H8 . 109.11(9) no Na1 2_766 O7 H8 . 123.42(10) no H9 . O7 H8 . 105.50(13) no Na1 . O5 H4 . 116.00(9) no Na1 . O5 H5 . 108.89(10) no H4 . O5 H5 . 104.86(12) no C2 . C1 O1 . 120.53(4) yes C2 . C1 O3 . 118.48(4) yes O1 . C1 O3 . 121.00(5) yes loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_site_symmetry_2 _geom_bond_distance _geom_bond_publ_flag Na1 O6 2_666 2.4130(11) yes Na1 O7 2_766 2.4514(12) yes Na1 Na1 2_766 3.4617(18) yes Na1 Na1 2_666 3.4716(17) yes Na1 O3 . 2.3721(12) yes Na1 O6 . 2.3988(12) yes Na1 O7 . 2.4002(11) yes Na1 O5 . 2.3774(11) yes C2 C3 . 1.3487(6) yes C2 H2 . 1.0928(11) no C2 C1 . 1.4988(7) yes C3 C4 . 1.5030(7) yes C3 H3 . 1.0922(12) no C4 O4 . 1.2547(7) yes C4 O2 . 1.2751(7) yes O1 H1 . 1.0813(12) no O1 C1 . 1.3060(7) yes O3 C1 . 1.2342(6) yes O6 H6 . 0.9738(13) no O6 H7 . 0.9703(14) no O7 H9 . 0.9661(12) no O7 H8 . 0.9774(13) no O5 H4 . 0.9770(12) no O5 H5 . 0.9750(12) no loop_ _geom_hbond_atom_site_label_D _geom_hbond_atom_site_label_H _geom_hbond_atom_site_label_A _geom_hbond_site_symmetry_A _geom_hbond_angle_DHA _geom_hbond_distance_DH _geom_hbond_distance_HA _geom_hbond_distance_DA _geom_hbond_publ_flag O6 H6 O3 1_455 164.54(12) 0.9741(13) 1.8858(14) 2.8365(9) yes O6 H7 O4 2_655 168.32(15) 0.9701(14) 1.9253(15) 2.8821(10) yes O7 H9 O4 1_556 175.41(11) 0.9662(12) 1.9571(13) 2.9212(9) yes O7 H8 O5 1_545 174.64(12) 0.9773(14) 1.8491(14) 2.8237(9) yes O5 H4 O4 2_665 172.97(12) 0.9771(12) 1.7744(13) 2.7467(9) yes O5 H5 O2 2_765 172.25(12) 0.9749(13) 1.8235(13) 2.7926(9) yes O1 H1 O2 . 175.86(11) 1.0813(11) 1.3685(11) 2.4483(8) yes