#------------------------------------------------------------------------------ #$Date: 2023-12-06 01:40:18 +0200 (Wed, 06 Dec 2023) $ #$Revision: 288056 $ #$URL: file:///home/coder/svn-repositories/cod/cif/7/24/78/7247833.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/ # # All data on this site have been placed in the public domain by the # contributors. # data_7247833 loop_ _publ_author_name 'Duan, Wen-Long' 'Yan, Ming-Yue' 'Yan, Feng' 'Luan, Jian' _publ_section_title ; Fabrication of 5-R-isophthalic acid-modulated two Cu-based coordination polymers as urease inhibitors ; _journal_name_full CrystEngComm _journal_paper_doi 10.1039/D3CE01109G _journal_year 2023 _chemical_formula_sum 'C27 H18 Cu N4 O9' _chemical_formula_weight 605.99 _space_group_IT_number 14 _space_group_name_Hall '-P 2yn' _space_group_name_H-M_alt 'P 1 21/n 1' _symmetry_cell_setting monoclinic _symmetry_space_group_name_H-M 'P 1 21/n 1' _atom_sites_solution_hydrogens geom _atom_sites_solution_primary direct _atom_sites_solution_secondary difmap _audit_creation_method SHELXL-97 _audit_update_record ; 2023-08-10 deposited with the CCDC. 2023-12-04 downloaded from the CCDC. ; _cell_angle_alpha 90.00 _cell_angle_beta 94.484(4) _cell_angle_gamma 90.00 _cell_formula_units_Z 4 _cell_length_a 5.1004(7) _cell_length_b 20.907(3) _cell_length_c 21.437(3) _cell_measurement_reflns_used 38329 _cell_measurement_temperature 296(2) _cell_measurement_theta_max 31.52 _cell_measurement_theta_min 1.91 _cell_volume 2278.9(6) _computing_cell_refinement 'SMART (Bruker, 2001)' _computing_data_collection 'SMART (Bruker, 2001)' _computing_data_reduction 'SAINT+ (Bruker, 1999)' _computing_molecular_graphics 'PLATON (Spek, 2003)' _computing_publication_material 'SHELXTL (1998)' _computing_structure_refinement 'SHELXL-97 (Sheldrick, 2008)' _computing_structure_solution 'SHELXS-97 (Sheldrick, 2008)' _diffrn_ambient_temperature 296(2) _diffrn_measured_fraction_theta_full 0.995 _diffrn_measured_fraction_theta_max 0.995 _diffrn_measurement_device_type 'CCD area detector' _diffrn_measurement_method 'phi and omega scans' _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'fine-focus sealed tube' _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength 0.71073 _diffrn_reflns_av_R_equivalents 0.0927 _diffrn_reflns_av_sigmaI/netI 0.0926 _diffrn_reflns_limit_h_max 7 _diffrn_reflns_limit_h_min -7 _diffrn_reflns_limit_k_max 30 _diffrn_reflns_limit_k_min -28 _diffrn_reflns_limit_l_max 31 _diffrn_reflns_limit_l_min -29 _diffrn_reflns_number 37672 _diffrn_reflns_theta_full 31.52 _diffrn_reflns_theta_max 31.52 _diffrn_reflns_theta_min 1.91 _exptl_absorpt_coefficient_mu 1.031 _exptl_absorpt_correction_T_max 0.893 _exptl_absorpt_correction_T_min 0.875 _exptl_absorpt_correction_type multi-scan _exptl_absorpt_process_details SADABS _exptl_crystal_colour BLUE _exptl_crystal_density_diffrn 1.766 _exptl_crystal_density_method 'not measured' _exptl_crystal_description BLOCK _exptl_crystal_F_000 1236 _exptl_crystal_size_max 0.13 _exptl_crystal_size_mid 0.12 _exptl_crystal_size_min 0.11 _refine_diff_density_max 2.640 _refine_diff_density_min -0.919 _refine_diff_density_rms 0.257 _refine_ls_extinction_method none _refine_ls_goodness_of_fit_ref 1.020 _refine_ls_hydrogen_treatment constr _refine_ls_matrix_type full _refine_ls_number_parameters 370 _refine_ls_number_reflns 7574 _refine_ls_number_restraints 0 _refine_ls_restrained_S_all 1.020 _refine_ls_R_factor_all 0.1570 _refine_ls_R_factor_gt 0.0763 _refine_ls_shift/su_max 0.000 _refine_ls_shift/su_mean 0.000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'calc w=1/[\s^2^(Fo^2^)+(0.1510P)^2^+0.0000P] where P=(Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_gt 0.2069 _refine_ls_wR_factor_ref 0.2602 _reflns_number_gt 4064 _reflns_number_total 7574 _reflns_threshold_expression >2sigma(I) _cod_data_source_file d3ce01109g2.cif _cod_data_source_block Cu_CP_COOH _cod_depositor_comments ; The following automatic conversions were performed: data item '_symmetry_cell_setting' value 'Monoclinic' was changed to 'monoclinic' in accordance with the /home/data/users/saulius/crontab/automatic-downloads/rss-feeds/RSC/lib/dictionaries/cif_core.dic dictionary named 'cif_core.dic' version 2.4.2 last updated on 2011-04-26. Automatic conversion script Id: cif_fix_values 8170 2020-07-09 18:12:32Z antanas ; _cod_original_cell_volume 2279.0(5) _cod_original_sg_symbol_H-M 'P 21/n' _cod_database_code 7247833 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x+1/2, y+1/2, -z+1/2' '-x, -y, -z' 'x-1/2, -y-1/2, z-1/2' loop_ _atom_site_label _atom_site_type_symbol _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_occupancy _atom_site_symmetry_multiplicity _atom_site_calc_flag _atom_site_refinement_flags _atom_site_disorder_assembly _atom_site_disorder_group Cu1 Cu 0.18547(11) 0.00208(2) 0.23918(2) 0.02224(17) Uani 1 1 d . . . N1 N 0.4290(7) 0.00403(15) 0.16722(17) 0.0195(7) Uani 1 1 d . . . C1 C 0.6287(9) -0.0381(2) 0.1671(2) 0.0270(9) Uani 1 1 d . . . H1A H 0.6504 -0.0678 0.1994 0.032 Uiso 1 1 calc R . . O1 O 0.3331(6) -0.07896(15) 0.26838(15) 0.0294(7) Uani 1 1 d . . . O2 O 0.0637(8) -0.14204(18) 0.20952(19) 0.0454(10) Uani 1 1 d . . . N2 N 1.4868(8) 0.49262(15) -0.18047(19) 0.0252(8) Uani 1 1 d . . . C2 C 0.8030(9) -0.0391(2) 0.1207(2) 0.0279(10) Uani 1 1 d . . . H2A H 0.9362 -0.0695 0.1217 0.033 Uiso 1 1 calc R . . O3 O 0.1476(7) -0.37759(17) 0.23467(16) 0.0355(8) Uani 1 1 d . . . N3 N 0.5519(7) 0.10168(18) 0.03007(18) 0.0272(8) Uani 1 1 d . . . H3B H 0.3952 0.1132 0.0171 0.033 Uiso 1 1 calc R . . C3 C 0.7778(11) 0.0054(2) 0.0731(2) 0.0314(10) Uani 1 1 d . . . H3A H 0.8884 0.0045 0.0407 0.038 Uiso 1 1 calc R . . O4 O 0.4834(6) -0.41907(14) 0.29194(14) 0.0263(7) Uani 1 1 d . . . N4 N 1.0264(8) 0.38496(18) -0.11071(18) 0.0304(9) Uani 1 1 d . . . H4A H 0.9298 0.3746 -0.1439 0.036 Uiso 1 1 calc R . . C4 C 0.5819(9) 0.0520(2) 0.0749(2) 0.0245(9) Uani 1 1 d . . . O5 O 1.1150(7) -0.27579(17) 0.41208(18) 0.0393(9) Uani 1 1 d . . . C5 C 0.4128(9) 0.0485(2) 0.1216(2) 0.0266(9) Uani 1 1 d . . . H5A H 0.2788 0.0786 0.1217 0.032 Uiso 1 1 calc R . . O6 O 1.0344(8) -0.17157(17) 0.41181(19) 0.0451(10) Uani 1 1 d . . . H6A H 1.0484 -0.1704 0.4516 0.054 Uiso 1 1 d R . . C6 C 0.7576(9) 0.1321(2) 0.0064(2) 0.0266(9) Uani 1 1 d . . . C7 C 0.6932(9) 0.1889(2) -0.0332(2) 0.0239(9) Uani 1 1 d . . . O7 O 0.9849(7) 0.11467(19) 0.0180(2) 0.0442(10) Uani 1 1 d . . . C8 C 0.8629(9) 0.2414(2) -0.0276(2) 0.0253(9) Uani 1 1 d . . . H8A H 1.0074 0.2408 0.0017 0.030 Uiso 1 1 calc R . . O8 O 1.1196(8) 0.36244(17) -0.00768(16) 0.0392(9) Uani 1 1 d . . . O9 O 0.2301(7) 0.24587(16) -0.16194(16) 0.0348(8) Uani 1 1 d . . . H9A H 0.0878 0.2364 -0.1460 0.042 Uiso 1 1 d R . . C9 C 0.8148(9) 0.2945(2) -0.0660(2) 0.0243(9) Uani 1 1 d . . . C10 C 0.6001(9) 0.2945(2) -0.1101(2) 0.0253(9) Uani 1 1 d . . . H10A H 0.5677 0.3301 -0.1355 0.030 Uiso 1 1 calc R . . C11 C 0.4335(9) 0.2421(2) -0.1167(2) 0.0268(9) Uani 1 1 d . . . C12 C 0.4743(9) 0.1898(2) -0.0769(2) 0.0270(9) Uani 1 1 d . . . H12A H 0.3569 0.1557 -0.0794 0.032 Uiso 1 1 calc R . . C13 C 0.9995(9) 0.3497(2) -0.0578(2) 0.0278(10) Uani 1 1 d . . . C14 C 1.1987(10) 0.4365(2) -0.1150(2) 0.0293(10) Uani 1 1 d . . . C15 C 1.2552(15) 0.4803(3) -0.0679(3) 0.0527(17) Uani 1 1 d . . . H15A H 1.1787 0.4767 -0.0301 0.063 Uiso 1 1 calc R . . C16 C 1.4255(16) 0.5290(3) -0.0777(3) 0.062(2) Uani 1 1 d . . . H16A H 1.4600 0.5598 -0.0469 0.074 Uiso 1 1 calc R . . C17 C 1.5457(13) 0.5329(3) -0.1323(3) 0.0433(14) Uani 1 1 d . . . H17A H 1.6722 0.5643 -0.1364 0.052 Uiso 1 1 calc R . . C18 C 1.3160(9) 0.4452(2) -0.1713(2) 0.0269(9) Uani 1 1 d . . . H18A H 1.2738 0.4168 -0.2039 0.032 Uiso 1 1 calc R . . C19 C 0.2485(10) -0.1342(2) 0.2494(2) 0.0270(9) Uani 1 1 d . . . C20 C 0.3960(9) -0.19041(19) 0.2788(2) 0.0221(8) Uani 1 1 d . . . C21 C 0.6157(9) -0.18292(19) 0.3216(2) 0.0262(9) Uani 1 1 d . . . H21A H 0.6731 -0.1421 0.3331 0.031 Uiso 1 1 calc R . . C22 C 0.7492(9) -0.2362(2) 0.3470(2) 0.0241(9) Uani 1 1 d . . . C23 C 0.9820(9) -0.2305(2) 0.3936(2) 0.0276(9) Uani 1 1 d . . . C24 C 0.6691(9) -0.2971(2) 0.3293(2) 0.0263(9) Uani 1 1 d . . . H24A H 0.7638 -0.3325 0.3449 0.032 Uiso 1 1 calc R . . C25 C 0.4470(9) -0.30573(19) 0.2882(2) 0.0225(8) Uani 1 1 d . . . C26 C 0.3503(9) -0.3710(2) 0.2698(2) 0.0223(9) Uani 1 1 d . . . C27 C 0.3107(9) -0.25244(19) 0.2635(2) 0.0238(9) Uani 1 1 d . . . H27A H 0.1611 -0.2583 0.2364 0.029 Uiso 1 1 calc R . . loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_23 _atom_site_aniso_U_13 _atom_site_aniso_U_12 Cu1 0.0279(3) 0.0131(2) 0.0260(3) 0.0023(2) 0.0040(2) 0.0037(2) N1 0.0238(17) 0.0135(14) 0.0215(17) 0.0033(13) 0.0027(13) 0.0041(13) C1 0.026(2) 0.023(2) 0.032(2) 0.0058(18) 0.0014(18) 0.0022(17) O1 0.0388(19) 0.0160(14) 0.0340(18) 0.0051(13) 0.0059(15) 0.0063(12) O2 0.042(2) 0.0312(19) 0.060(3) 0.0095(18) -0.0196(19) 0.0036(16) N2 0.031(2) 0.0147(16) 0.031(2) -0.0032(14) 0.0086(16) -0.0076(13) C2 0.026(2) 0.0201(19) 0.037(3) -0.0006(18) 0.0032(19) 0.0037(17) O3 0.040(2) 0.0271(18) 0.0370(19) -0.0004(14) -0.0104(16) -0.0075(14) N3 0.0225(19) 0.0266(18) 0.032(2) 0.0124(16) -0.0003(15) 0.0013(15) C3 0.046(3) 0.021(2) 0.027(2) 0.0030(18) 0.002(2) -0.0044(19) O4 0.0320(17) 0.0152(13) 0.0312(17) 0.0006(12) -0.0008(13) -0.0028(12) N4 0.035(2) 0.029(2) 0.027(2) 0.0043(16) -0.0021(16) -0.0130(16) C4 0.026(2) 0.0181(18) 0.029(2) 0.0034(17) -0.0020(17) -0.0020(16) O5 0.039(2) 0.0300(18) 0.047(2) 0.0039(16) -0.0131(17) 0.0036(15) C5 0.025(2) 0.023(2) 0.031(2) 0.0034(18) -0.0020(18) 0.0038(17) O6 0.057(3) 0.0261(17) 0.048(2) -0.0059(16) -0.0233(19) -0.0047(17) C6 0.027(2) 0.023(2) 0.029(2) 0.0053(18) -0.0008(18) -0.0008(17) C7 0.023(2) 0.0210(19) 0.028(2) 0.0040(17) 0.0034(17) 0.0005(16) O7 0.0258(19) 0.042(2) 0.065(3) 0.0280(19) 0.0042(17) 0.0027(15) C8 0.028(2) 0.024(2) 0.024(2) 0.0048(17) 0.0008(17) -0.0007(17) O8 0.051(2) 0.0322(18) 0.0315(19) 0.0080(15) -0.0130(16) -0.0142(17) O9 0.0281(17) 0.0390(19) 0.0354(19) 0.0083(15) -0.0106(14) -0.0092(15) C9 0.026(2) 0.0208(19) 0.026(2) 0.0063(16) -0.0003(17) -0.0038(16) C10 0.025(2) 0.024(2) 0.026(2) 0.0081(17) -0.0038(17) -0.0004(17) C11 0.024(2) 0.028(2) 0.028(2) 0.0034(18) -0.0009(17) -0.0049(18) C12 0.024(2) 0.023(2) 0.034(2) 0.0066(18) 0.0004(19) -0.0035(17) C13 0.027(2) 0.023(2) 0.033(2) 0.0067(18) 0.0000(19) -0.0054(17) C14 0.033(3) 0.024(2) 0.031(2) 0.0051(18) 0.006(2) -0.0072(18) C15 0.081(5) 0.043(3) 0.037(3) -0.009(3) 0.021(3) -0.023(3) C16 0.111(6) 0.033(3) 0.044(3) -0.019(3) 0.024(4) -0.040(3) C17 0.065(4) 0.031(3) 0.036(3) -0.012(2) 0.016(3) -0.021(3) C18 0.033(2) 0.0192(19) 0.029(2) -0.0016(17) 0.0004(19) -0.0055(17) C19 0.030(2) 0.0195(19) 0.033(2) 0.0097(18) 0.0080(19) 0.0042(17) C20 0.025(2) 0.0165(18) 0.025(2) 0.0058(16) 0.0014(17) 0.0046(15) C21 0.034(2) 0.0143(18) 0.030(2) 0.0000(16) 0.0014(19) 0.0010(16) C22 0.029(2) 0.0164(18) 0.026(2) 0.0011(16) -0.0033(18) 0.0018(16) C23 0.031(2) 0.022(2) 0.029(2) 0.0034(18) -0.0027(19) -0.0044(17) C24 0.032(2) 0.0157(18) 0.030(2) 0.0022(17) -0.0041(19) 0.0031(16) C25 0.030(2) 0.0139(17) 0.023(2) 0.0000(15) 0.0000(17) 0.0001(16) C26 0.028(2) 0.0187(19) 0.021(2) 0.0000(15) 0.0038(17) -0.0043(16) C27 0.025(2) 0.0189(19) 0.027(2) 0.0027(16) -0.0023(17) -0.0013(16) loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N 0.0061 0.0033 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0106 0.0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' Cu Cu 0.3201 1.2651 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle _geom_angle_site_symmetry_1 _geom_angle_site_symmetry_3 _geom_angle_publ_flag O1 Cu1 O4 176.45(14) . 2 ? O1 Cu1 N1 91.00(13) . . ? O4 Cu1 N1 90.18(13) 2 . ? O1 Cu1 N2 88.92(13) . 4_466 ? O4 Cu1 N2 90.43(13) 2 4_466 ? N1 Cu1 N2 171.16(15) . 4_466 ? C5 N1 C1 116.9(4) . . ? C5 N1 Cu1 123.6(3) . . ? C1 N1 Cu1 119.4(3) . . ? N1 C1 C2 122.6(4) . . ? C19 O1 Cu1 124.7(3) . . ? C18 N2 C17 117.2(4) . . ? C18 N2 Cu1 121.8(3) . 4_765 ? C17 N2 Cu1 120.7(3) . 4_765 ? C3 C2 C1 119.6(4) . . ? C6 N3 C4 123.5(4) . . ? C2 C3 C4 118.4(5) . . ? C26 O4 Cu1 109.2(3) . 2_545 ? C13 N4 C14 125.1(4) . . ? C5 C4 C3 118.2(4) . . ? C5 C4 N3 119.6(4) . . ? C3 C4 N3 122.2(4) . . ? N1 C5 C4 124.1(4) . . ? O7 C6 N3 122.1(4) . . ? O7 C6 C7 121.3(4) . . ? N3 C6 C7 116.5(4) . . ? C8 C7 C12 120.2(4) . . ? C8 C7 C6 118.2(4) . . ? C12 C7 C6 121.6(4) . . ? C9 C8 C7 119.7(4) . . ? C10 C9 C8 119.7(4) . . ? C10 C9 C13 122.5(4) . . ? C8 C9 C13 117.8(4) . . ? C11 C10 C9 120.8(4) . . ? O9 C11 C10 116.8(4) . . ? O9 C11 C12 123.3(4) . . ? C10 C11 C12 119.8(4) . . ? C11 C12 C7 119.6(4) . . ? O8 C13 N4 122.3(4) . . ? O8 C13 C9 122.7(4) . . ? N4 C13 C9 115.0(4) . . ? C15 C14 N4 124.1(5) . . ? C15 C14 C18 117.8(4) . . ? N4 C14 C18 118.1(4) . . ? C16 C15 C14 118.9(5) . . ? C15 C16 C17 120.6(5) . . ? N2 C17 C16 122.1(5) . . ? N2 C18 C14 123.2(4) . . ? O2 C19 O1 123.9(4) . . ? O2 C19 C20 121.1(4) . . ? O1 C19 C20 115.0(4) . . ? C27 C20 C21 118.4(4) . . ? C27 C20 C19 119.3(4) . . ? C21 C20 C19 122.3(4) . . ? C22 C21 C20 120.6(4) . . ? C24 C22 C21 120.2(4) . . ? C24 C22 C23 117.4(4) . . ? C21 C22 C23 122.4(4) . . ? O5 C23 O6 122.7(4) . . ? O5 C23 C22 123.4(4) . . ? O6 C23 C22 113.9(4) . . ? C22 C24 C25 120.1(4) . . ? C24 C25 C27 119.6(4) . . ? C24 C25 C26 121.4(4) . . ? C27 C25 C26 119.0(4) . . ? O3 C26 O4 122.1(4) . . ? O3 C26 C25 120.3(4) . . ? O4 C26 C25 117.6(4) . . ? C25 C27 C20 120.9(4) . . ? loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_distance _geom_bond_site_symmetry_2 _geom_bond_publ_flag Cu1 O1 1.938(3) . ? Cu1 O4 1.953(3) 2 ? Cu1 N1 2.055(4) . ? Cu1 N2 2.068(4) 4_466 ? N1 C5 1.347(5) . ? N1 C1 1.348(5) . ? C1 C2 1.384(7) . ? O1 C19 1.288(6) . ? O2 C19 1.233(6) . ? N2 C18 1.344(5) . ? N2 C17 1.347(6) . ? N2 Cu1 2.069(4) 4_765 ? C2 C3 1.379(6) . ? O3 C26 1.238(5) . ? N3 C6 1.359(6) . ? N3 C4 1.416(5) . ? C3 C4 1.398(7) . ? O4 C26 1.282(5) . ? O4 Cu1 1.953(3) 2_545 ? N4 C13 1.369(6) . ? N4 C14 1.398(5) . ? C4 C5 1.372(6) . ? O5 C23 1.213(6) . ? O6 C23 1.313(5) . ? C6 O7 1.223(6) . ? C6 C7 1.481(6) . ? C7 C8 1.396(6) . ? C7 C12 1.401(6) . ? C8 C9 1.394(6) . ? O8 C13 1.224(6) . ? O9 C11 1.366(5) . ? C9 C10 1.390(6) . ? C9 C13 1.491(6) . ? C10 C11 1.388(6) . ? C11 C12 1.390(6) . ? C14 C15 1.377(7) . ? C14 C18 1.400(7) . ? C15 C16 1.366(8) . ? C16 C17 1.366(8) . ? C19 C20 1.507(6) . ? C20 C27 1.399(6) . ? C20 C21 1.400(6) . ? C21 C22 1.394(6) . ? C22 C24 1.382(6) . ? C22 C23 1.495(6) . ? C24 C25 1.391(6) . ? C25 C27 1.396(6) . ? C25 C26 1.494(6) . ?